Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
SALL4Q9UJQ4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.95■□□□□ 0.78
SALL4Q9UJQ4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SALL4Q9UJQ4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SALL4Q9UJQ4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.95■□□□□ 0.78
SALL4Q9UJQ4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 KRT8P32-201ENST00000512863 1461 ntBASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 AC069544.1-201ENST00000609399 999 ntBASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 AL162741.1-201ENST00000565563 1558 ntBASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SALL4Q9UJQ4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.93■□□□□ 0.78
SALL4Q9UJQ4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SALL4Q9UJQ4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SALL4Q9UJQ4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SALL4Q9UJQ4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SALL4Q9UJQ4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.93■□□□□ 0.78
SALL4Q9UJQ4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.93■□□□□ 0.78
SALL4Q9UJQ4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.93■□□□□ 0.78
SALL4Q9UJQ4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SALL4Q9UJQ4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.93■□□□□ 0.78
SALL4Q9UJQ4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.93■□□□□ 0.78
SALL4Q9UJQ4 AC004264.1-201ENST00000608354 794 ntBASIC19.93■□□□□ 0.78
SALL4Q9UJQ4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.93■□□□□ 0.78
SALL4Q9UJQ4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
SALL4Q9UJQ4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SALL4Q9UJQ4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SALL4Q9UJQ4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.93■□□□□ 0.78
SALL4Q9UJQ4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SALL4Q9UJQ4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.93■□□□□ 0.78
SALL4Q9UJQ4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SALL4Q9UJQ4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SALL4Q9UJQ4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SALL4Q9UJQ4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SALL4Q9UJQ4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms