Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RIMBP3Q9UFD9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC29.75■■■□□ 2.35
RIMBP3Q9UFD9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
RIMBP3Q9UFD9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
RIMBP3Q9UFD9 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
RIMBP3Q9UFD9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RIMBP3Q9UFD9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC29.75■■■□□ 2.35
RIMBP3Q9UFD9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC29.75■■■□□ 2.35
RIMBP3Q9UFD9 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC29.75■■■□□ 2.35
RIMBP3Q9UFD9 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RIMBP3Q9UFD9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
RIMBP3Q9UFD9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC29.74■■■□□ 2.35
RIMBP3Q9UFD9 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC29.74■■■□□ 2.35
RIMBP3Q9UFD9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RIMBP3Q9UFD9 AC108751.1-201ENST00000490852 363 ntBASIC29.74■■■□□ 2.35
RIMBP3Q9UFD9 AP000344.2-201ENST00000512987 629 ntBASIC29.74■■■□□ 2.35
RIMBP3Q9UFD9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC29.74■■■□□ 2.35
RIMBP3Q9UFD9 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC29.74■■■□□ 2.35
RIMBP3Q9UFD9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC29.74■■■□□ 2.35
RIMBP3Q9UFD9 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RIMBP3Q9UFD9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
RIMBP3Q9UFD9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RIMBP3Q9UFD9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
RIMBP3Q9UFD9 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RIMBP3Q9UFD9 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC29.74■■■□□ 2.35
RIMBP3Q9UFD9 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
RIMBP3Q9UFD9 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC29.74■■■□□ 2.35
RIMBP3Q9UFD9 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC29.74■■■□□ 2.35
RIMBP3Q9UFD9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RIMBP3Q9UFD9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC29.73■■■□□ 2.35
RIMBP3Q9UFD9 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC29.73■■■□□ 2.35
RIMBP3Q9UFD9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
RIMBP3Q9UFD9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
RIMBP3Q9UFD9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
RIMBP3Q9UFD9 AC092720.2-201ENST00000602388 1665 ntBASIC29.73■■■□□ 2.35
RIMBP3Q9UFD9 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
RIMBP3Q9UFD9 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC29.73■■■□□ 2.35
RIMBP3Q9UFD9 MEG3-211ENST00000452514 461 ntTSL 3 BASIC29.73■■■□□ 2.35
RIMBP3Q9UFD9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC29.73■■■□□ 2.35
RIMBP3Q9UFD9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC29.73■■■□□ 2.35
RIMBP3Q9UFD9 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC29.73■■■□□ 2.35
RIMBP3Q9UFD9 RNF151-202ENST00000569210 853 ntTSL 2 BASIC29.73■■■□□ 2.35
RIMBP3Q9UFD9 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC29.73■■■□□ 2.35
RIMBP3Q9UFD9 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
RIMBP3Q9UFD9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
RIMBP3Q9UFD9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC29.73■■■□□ 2.35
RIMBP3Q9UFD9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC29.72■■■□□ 2.35
RIMBP3Q9UFD9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC29.72■■■□□ 2.35
RIMBP3Q9UFD9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC29.72■■■□□ 2.35
RIMBP3Q9UFD9 LAGE3P1-201ENST00000425356 484 ntBASIC29.72■■■□□ 2.35
RIMBP3Q9UFD9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC29.72■■■□□ 2.35
RIMBP3Q9UFD9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
RIMBP3Q9UFD9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC29.72■■■□□ 2.35
RIMBP3Q9UFD9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC29.72■■■□□ 2.35
RIMBP3Q9UFD9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC29.72■■■□□ 2.35
RIMBP3Q9UFD9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC29.72■■■□□ 2.35
RIMBP3Q9UFD9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
RIMBP3Q9UFD9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
RIMBP3Q9UFD9 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
RIMBP3Q9UFD9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
RIMBP3Q9UFD9 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
RIMBP3Q9UFD9 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
RIMBP3Q9UFD9 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
RIMBP3Q9UFD9 AL008721.1-201ENST00000609964 604 ntBASIC29.71■■■□□ 2.35
RIMBP3Q9UFD9 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
RIMBP3Q9UFD9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
RIMBP3Q9UFD9 AC244015.2-201ENST00000616358 1861 ntBASIC29.71■■■□□ 2.35
RIMBP3Q9UFD9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
RIMBP3Q9UFD9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
RIMBP3Q9UFD9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
RIMBP3Q9UFD9 Z98882.1-201ENST00000622160 2253 ntBASIC29.71■■■□□ 2.35
RIMBP3Q9UFD9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC29.71■■■□□ 2.35
RIMBP3Q9UFD9 AC104417.2-201ENST00000562989 1793 ntBASIC29.71■■■□□ 2.35
RIMBP3Q9UFD9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
RIMBP3Q9UFD9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
RIMBP3Q9UFD9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC29.71■■■□□ 2.35
RIMBP3Q9UFD9 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC29.71■■■□□ 2.35
RIMBP3Q9UFD9 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC29.71■■■□□ 2.35
RIMBP3Q9UFD9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC29.71■■■□□ 2.35
RIMBP3Q9UFD9 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC29.71■■■□□ 2.35
RIMBP3Q9UFD9 METTL23-205ENST00000588302 925 ntTSL 5 BASIC29.71■■■□□ 2.35
RIMBP3Q9UFD9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.35
RIMBP3Q9UFD9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC29.7■■■□□ 2.35
RIMBP3Q9UFD9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
RIMBP3Q9UFD9 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
RIMBP3Q9UFD9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC29.7■■■□□ 2.35
RIMBP3Q9UFD9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.35
RIMBP3Q9UFD9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC29.7■■■□□ 2.35
RIMBP3Q9UFD9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC29.7■■■□□ 2.34
RIMBP3Q9UFD9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
RIMBP3Q9UFD9 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC29.7■■■□□ 2.34
RIMBP3Q9UFD9 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC29.7■■■□□ 2.34
RIMBP3Q9UFD9 KRT18P27-201ENST00000427733 1299 ntBASIC29.7■■■□□ 2.34
RIMBP3Q9UFD9 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC29.7■■■□□ 2.34
RIMBP3Q9UFD9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
RIMBP3Q9UFD9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
RIMBP3Q9UFD9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
RIMBP3Q9UFD9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
RIMBP3Q9UFD9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
RIMBP3Q9UFD9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC29.69■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms