Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 AC008622.2-201ENST00000617006 1229 ntBASIC19.1■□□□□ 0.65
UBP1Q9NZI7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.09■□□□□ 0.65
UBP1Q9NZI7 AC068587.9-201ENST00000641814 219 ntBASIC19.09■□□□□ 0.65
UBP1Q9NZI7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 NEFHP1-201ENST00000412845 2629 ntBASIC19.09■□□□□ 0.65
UBP1Q9NZI7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 KRT8P32-201ENST00000512863 1461 ntBASIC19.09■□□□□ 0.65
UBP1Q9NZI7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.09■□□□□ 0.65
UBP1Q9NZI7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.08■□□□□ 0.65
UBP1Q9NZI7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.08■□□□□ 0.65
UBP1Q9NZI7 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.08■□□□□ 0.65
UBP1Q9NZI7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
UBP1Q9NZI7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.08■□□□□ 0.65
UBP1Q9NZI7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBP1Q9NZI7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
UBP1Q9NZI7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.08■□□□□ 0.65
UBP1Q9NZI7 KRT17P2-201ENST00000300992 1314 ntBASIC19.08■□□□□ 0.65
UBP1Q9NZI7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
UBP1Q9NZI7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBP1Q9NZI7 AL499627.1-201ENST00000569373 2188 ntBASIC19.08■□□□□ 0.65
UBP1Q9NZI7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBP1Q9NZI7 MIR1238-201ENST00000408483 83 ntBASIC19.08■□□□□ 0.64
UBP1Q9NZI7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UBP1Q9NZI7 AL596275.1-201ENST00000423464 877 ntBASIC19.08■□□□□ 0.64
UBP1Q9NZI7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UBP1Q9NZI7 RCC2P3-201ENST00000418112 1537 ntBASIC19.08■□□□□ 0.64
UBP1Q9NZI7 MTMR9LP-203ENST00000426597 1545 ntBASIC19.08■□□□□ 0.64
UBP1Q9NZI7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.08■□□□□ 0.64
UBP1Q9NZI7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms