Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 MTMR9LP-203ENST00000426597 1545 ntBASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 AC120498.9-201ENST00000339021 3867 ntBASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 MIR564-202ENST00000385049 94 ntBASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 AC140113.3-201ENST00000605663 199 ntBASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPHK1Q9NYA1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 NEK4P2-201ENST00000580004 1012 ntBASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 AL357033.4-201ENST00000617703 1807 ntBASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPHK1Q9NYA1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 AP000974.1-201ENST00000623909 2387 ntBASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 RNF152P1-201ENST00000397754 604 ntBASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 TSPY5P-201ENST00000426936 936 ntBASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 GCSHP2-201ENST00000560971 527 ntBASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPHK1Q9NYA1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.02■□□□□ 0.48
SPHK1Q9NYA1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms