Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 OR4A19P-201ENST00000533579 1103 ntBASIC21.57■■□□□ 1.04
RNF216Q9NWF9 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF216Q9NWF9 CD69-203ENST00000536709 1020 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF216Q9NWF9 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF216Q9NWF9 AC145285.6-201ENST00000604632 637 ntBASIC21.57■■□□□ 1.04
RNF216Q9NWF9 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.57■■□□□ 1.04
RNF216Q9NWF9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF216Q9NWF9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF216Q9NWF9 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF216Q9NWF9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF216Q9NWF9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF216Q9NWF9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.57■■□□□ 1.04
RNF216Q9NWF9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF216Q9NWF9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.57■■□□□ 1.04
RNF216Q9NWF9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF216Q9NWF9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF216Q9NWF9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF216Q9NWF9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RNF216Q9NWF9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF216Q9NWF9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF216Q9NWF9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF216Q9NWF9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RNF216Q9NWF9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF216Q9NWF9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.56■■□□□ 1.04
RNF216Q9NWF9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF216Q9NWF9 SEPT7P2-202ENST00000398921 823 ntBASIC21.56■■□□□ 1.04
RNF216Q9NWF9 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF216Q9NWF9 TPTE2P1-204ENST00000435256 593 ntBASIC21.56■■□□□ 1.04
RNF216Q9NWF9 AC116562.2-201ENST00000507042 360 ntBASIC21.56■■□□□ 1.04
RNF216Q9NWF9 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC21.56■■□□□ 1.04
RNF216Q9NWF9 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC21.56■■□□□ 1.04
RNF216Q9NWF9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.56■■□□□ 1.04
RNF216Q9NWF9 REXO1L10P-201ENST00000615707 1290 ntBASIC21.56■■□□□ 1.04
RNF216Q9NWF9 AP000842.4-201ENST00000638781 748 ntBASIC21.56■■□□□ 1.04
RNF216Q9NWF9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.56■■□□□ 1.04
RNF216Q9NWF9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF216Q9NWF9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF216Q9NWF9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF216Q9NWF9 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 AIRN-201ENST00000601203 4374 ntBASIC21.55■■□□□ 1.04
RNF216Q9NWF9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 RFC3P1-201ENST00000454568 682 ntBASIC21.55■■□□□ 1.04
RNF216Q9NWF9 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 AC006386.1-201ENST00000619436 415 ntBASIC21.55■■□□□ 1.04
RNF216Q9NWF9 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 AC125437.2-201ENST00000625180 2167 ntBASIC21.55■■□□□ 1.04
RNF216Q9NWF9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 AP006587.1-201ENST00000534129 1502 ntBASIC21.55■■□□□ 1.04
RNF216Q9NWF9 KRT16P6-202ENST00000425692 1426 ntBASIC21.55■■□□□ 1.04
RNF216Q9NWF9 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF216Q9NWF9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF216Q9NWF9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF216Q9NWF9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF216Q9NWF9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNF216Q9NWF9 RCN1P1-201ENST00000400413 996 ntBASIC21.54■■□□□ 1.04
RNF216Q9NWF9 LIPK-201ENST00000404190 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF216Q9NWF9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.54■■□□□ 1.04
RNF216Q9NWF9 OR4A18P-201ENST00000529103 1088 ntBASIC21.54■■□□□ 1.04
RNF216Q9NWF9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF216Q9NWF9 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC21.54■■□□□ 1.04
RNF216Q9NWF9 E2F3P1-201ENST00000589887 1230 ntBASIC21.54■■□□□ 1.04
RNF216Q9NWF9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF216Q9NWF9 RPL21P136-201ENST00000605378 396 ntBASIC21.54■■□□□ 1.04
RNF216Q9NWF9 AC005363.2-201ENST00000618631 242 ntBASIC21.54■■□□□ 1.04
RNF216Q9NWF9 CR392000.1-201ENST00000624770 1228 ntBASIC21.54■■□□□ 1.04
RNF216Q9NWF9 AL031985.4-201ENST00000642138 673 ntBASIC21.54■■□□□ 1.04
RNF216Q9NWF9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF216Q9NWF9 AC138932.1-201ENST00000534164 6830 ntBASIC21.54■■□□□ 1.04
RNF216Q9NWF9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF216Q9NWF9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF216Q9NWF9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF216Q9NWF9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF216Q9NWF9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF216Q9NWF9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF216Q9NWF9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
RNF216Q9NWF9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.53■■□□□ 1.04
RNF216Q9NWF9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF216Q9NWF9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms