Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 AC026471.1-201ENST00000564629 3026 ntBASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 LETM1P2-201ENST00000597330 2178 ntBASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 TSPY21P-201ENST00000433481 731 ntBASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 AL158047.1-201ENST00000445918 881 ntBASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LIN7CQ9NUP9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 AL354751.1-201ENST00000412768 1863 ntBASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 UBE2SP1-201ENST00000450587 669 ntBASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 KRT16P5-201ENST00000455284 522 ntBASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LIN7CQ9NUP9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LIN7CQ9NUP9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
LIN7CQ9NUP9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
LIN7CQ9NUP9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LIN7CQ9NUP9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.09
LIN7CQ9NUP9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LIN7CQ9NUP9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LIN7CQ9NUP9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
LIN7CQ9NUP9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms