Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CDC42SE2Q9NRR3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDC42SE2Q9NRR3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC12.94□□□□□ -0.34
CDC42SE2Q9NRR3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDC42SE2Q9NRR3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC12.94□□□□□ -0.34
CDC42SE2Q9NRR3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CDC42SE2Q9NRR3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDC42SE2Q9NRR3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC12.94□□□□□ -0.34
CDC42SE2Q9NRR3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
CDC42SE2Q9NRR3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDC42SE2Q9NRR3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDC42SE2Q9NRR3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDC42SE2Q9NRR3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CDC42SE2Q9NRR3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDC42SE2Q9NRR3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDC42SE2Q9NRR3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 MYC-208ENST00000641036 567 ntBASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 NFYC-AS1-201ENST00000606277 1687 ntBASIC12.93□□□□□ -0.34
CDC42SE2Q9NRR3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 AC098934.4-201ENST00000564127 592 ntBASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 AC068587.9-201ENST00000641814 219 ntBASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE2Q9NRR3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms