Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHB16Q9NRJ7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 SOX15-203ENST00000570788 1093 ntBASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHB16Q9NRJ7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 AC004264.1-201ENST00000608354 794 ntBASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHB16Q9NRJ7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB16Q9NRJ7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PCDHB16Q9NRJ7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PCDHB16Q9NRJ7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms