Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 AL162430.1-201ENST00000480705 870 ntBASIC17.05■□□□□ 0.32
HMG20AQ9NP66 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMG20AQ9NP66 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 BID-214ENST00000617586 542 ntTSL 5 BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMG20AQ9NP66 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.03■□□□□ 0.32
HMG20AQ9NP66 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 MCRIP2P1-201ENST00000394346 511 ntBASIC17.03■□□□□ 0.32
HMG20AQ9NP66 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 ANO7L1-203ENST00000602586 1720 ntBASIC17.03■□□□□ 0.32
HMG20AQ9NP66 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 AC046158.3-201ENST00000624947 2558 ntBASIC17.03■□□□□ 0.32
HMG20AQ9NP66 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.03■□□□□ 0.32
HMG20AQ9NP66 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 AD000864.1-201ENST00000624076 2295 ntBASIC17.02■□□□□ 0.32
HMG20AQ9NP66 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms