Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.42■□□□□ 0.38
CHD8Q9HCK8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHD8Q9HCK8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.42■□□□□ 0.38
CHD8Q9HCK8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.42■□□□□ 0.38
CHD8Q9HCK8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHD8Q9HCK8 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.42■□□□□ 0.38
CHD8Q9HCK8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.42■□□□□ 0.38
CHD8Q9HCK8 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHD8Q9HCK8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.42■□□□□ 0.38
CHD8Q9HCK8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.42■□□□□ 0.38
CHD8Q9HCK8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.42■□□□□ 0.38
CHD8Q9HCK8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CHD8Q9HCK8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CHD8Q9HCK8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.42■□□□□ 0.38
CHD8Q9HCK8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHD8Q9HCK8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CHD8Q9HCK8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHD8Q9HCK8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.41■□□□□ 0.38
CHD8Q9HCK8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.41■□□□□ 0.38
CHD8Q9HCK8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CHD8Q9HCK8 Z98882.1-201ENST00000622160 2253 ntBASIC17.41■□□□□ 0.38
CHD8Q9HCK8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHD8Q9HCK8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
CHD8Q9HCK8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.41■□□□□ 0.38
CHD8Q9HCK8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.41■□□□□ 0.38
CHD8Q9HCK8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHD8Q9HCK8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.41■□□□□ 0.38
CHD8Q9HCK8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.41■□□□□ 0.38
CHD8Q9HCK8 AC009947.1-201ENST00000444350 727 ntBASIC17.41■□□□□ 0.38
CHD8Q9HCK8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD8Q9HCK8 AC022494.1-201ENST00000466044 728 ntBASIC17.41■□□□□ 0.38
CHD8Q9HCK8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHD8Q9HCK8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CHD8Q9HCK8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD8Q9HCK8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD8Q9HCK8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.41■□□□□ 0.38
CHD8Q9HCK8 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD8Q9HCK8 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.4■□□□□ 0.38
CHD8Q9HCK8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CHD8Q9HCK8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.4■□□□□ 0.38
CHD8Q9HCK8 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.4■□□□□ 0.38
CHD8Q9HCK8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.4■□□□□ 0.38
CHD8Q9HCK8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
CHD8Q9HCK8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.4■□□□□ 0.38
CHD8Q9HCK8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD8Q9HCK8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.4■□□□□ 0.38
CHD8Q9HCK8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD8Q9HCK8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD8Q9HCK8 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHD8Q9HCK8 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.4■□□□□ 0.38
CHD8Q9HCK8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.4■□□□□ 0.38
CHD8Q9HCK8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.4■□□□□ 0.38
CHD8Q9HCK8 AC024563.2-201ENST00000603282 481 ntBASIC17.4■□□□□ 0.38
CHD8Q9HCK8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CHD8Q9HCK8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD8Q9HCK8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.4■□□□□ 0.38
CHD8Q9HCK8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CHD8Q9HCK8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
CHD8Q9HCK8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.4■□□□□ 0.38
CHD8Q9HCK8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
CHD8Q9HCK8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
CHD8Q9HCK8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
CHD8Q9HCK8 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CHD8Q9HCK8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.39■□□□□ 0.38
CHD8Q9HCK8 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.39■□□□□ 0.38
CHD8Q9HCK8 AL606495.2-201ENST00000605867 535 ntBASIC17.39■□□□□ 0.38
CHD8Q9HCK8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHD8Q9HCK8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHD8Q9HCK8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD8Q9HCK8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.39■□□□□ 0.37
CHD8Q9HCK8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD8Q9HCK8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD8Q9HCK8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD8Q9HCK8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.39■□□□□ 0.37
CHD8Q9HCK8 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.39■□□□□ 0.37
CHD8Q9HCK8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.39■□□□□ 0.37
CHD8Q9HCK8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.39■□□□□ 0.37
CHD8Q9HCK8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
CHD8Q9HCK8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHD8Q9HCK8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD8Q9HCK8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 TSEN15P1-201ENST00000423257 515 ntBASIC17.38■□□□□ 0.37
CHD8Q9HCK8 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 AF106564.1-201ENST00000607058 2553 ntBASIC17.38■□□□□ 0.37
CHD8Q9HCK8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.38■□□□□ 0.37
CHD8Q9HCK8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms