Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
VAT1LQ9HCJ6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VAT1LQ9HCJ6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.72■■□□□ 1.07
VAT1LQ9HCJ6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.72■■□□□ 1.07
VAT1LQ9HCJ6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
VAT1LQ9HCJ6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
VAT1LQ9HCJ6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
VAT1LQ9HCJ6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VAT1LQ9HCJ6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.72■■□□□ 1.07
VAT1LQ9HCJ6 GCSHP2-201ENST00000560971 527 ntBASIC21.72■■□□□ 1.07
VAT1LQ9HCJ6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VAT1LQ9HCJ6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
VAT1LQ9HCJ6 AL031432.5-201ENST00000641059 760 ntBASIC21.72■■□□□ 1.07
VAT1LQ9HCJ6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
VAT1LQ9HCJ6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VAT1LQ9HCJ6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VAT1LQ9HCJ6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VAT1LQ9HCJ6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.72■■□□□ 1.07
VAT1LQ9HCJ6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
VAT1LQ9HCJ6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VAT1LQ9HCJ6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 AC022616.7-201ENST00000525383 220 ntBASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 AC024243.1-201ENST00000609234 778 ntBASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 AL109659.2-201ENST00000606809 1674 ntBASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
VAT1LQ9HCJ6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
VAT1LQ9HCJ6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
VAT1LQ9HCJ6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 AC092647.4-201ENST00000457211 535 ntBASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VAT1LQ9HCJ6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 AL359075.1-203ENST00000462729 1002 ntBASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 NEK4P2-201ENST00000580004 1012 ntBASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VAT1LQ9HCJ6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms