Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
CDT1Q9H211 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDT1Q9H211 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDT1Q9H211 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.31■□□□□ 0.84
CDT1Q9H211 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDT1Q9H211 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CDT1Q9H211 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.31■□□□□ 0.84
CDT1Q9H211 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.31■□□□□ 0.84
CDT1Q9H211 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.31■□□□□ 0.84
CDT1Q9H211 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDT1Q9H211 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDT1Q9H211 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CDT1Q9H211 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDT1Q9H211 AC006333.2-201ENST00000607957 2099 ntBASIC20.31■□□□□ 0.84
CDT1Q9H211 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CDT1Q9H211 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDT1Q9H211 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.31■□□□□ 0.84
CDT1Q9H211 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDT1Q9H211 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDT1Q9H211 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDT1Q9H211 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.3■□□□□ 0.84
CDT1Q9H211 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDT1Q9H211 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.3■□□□□ 0.84
CDT1Q9H211 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.3■□□□□ 0.84
CDT1Q9H211 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.3■□□□□ 0.84
CDT1Q9H211 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.3■□□□□ 0.84
CDT1Q9H211 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.3■□□□□ 0.84
CDT1Q9H211 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CDT1Q9H211 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDT1Q9H211 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
CDT1Q9H211 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.3■□□□□ 0.84
CDT1Q9H211 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.3■□□□□ 0.84
CDT1Q9H211 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDT1Q9H211 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CDT1Q9H211 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDT1Q9H211 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDT1Q9H211 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CDT1Q9H211 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDT1Q9H211 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDT1Q9H211 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
CDT1Q9H211 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.29■□□□□ 0.84
CDT1Q9H211 KRT8P7-201ENST00000533003 1432 ntBASIC20.29■□□□□ 0.84
CDT1Q9H211 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CDT1Q9H211 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDT1Q9H211 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDT1Q9H211 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDT1Q9H211 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.29■□□□□ 0.84
CDT1Q9H211 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDT1Q9H211 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.29■□□□□ 0.84
CDT1Q9H211 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDT1Q9H211 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDT1Q9H211 AC112907.2-201ENST00000448639 330 ntBASIC20.29■□□□□ 0.84
CDT1Q9H211 AL671277.2-201ENST00000458060 996 ntBASIC20.29■□□□□ 0.84
CDT1Q9H211 RASA4DP-201ENST00000460726 1199 ntBASIC20.29■□□□□ 0.84
CDT1Q9H211 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDT1Q9H211 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.29■□□□□ 0.84
CDT1Q9H211 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.29■□□□□ 0.84
CDT1Q9H211 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
CDT1Q9H211 HYMAI.1-201ENST00000620949 238 ntBASIC20.29■□□□□ 0.84
CDT1Q9H211 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.29■□□□□ 0.84
CDT1Q9H211 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDT1Q9H211 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDT1Q9H211 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDT1Q9H211 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDT1Q9H211 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDT1Q9H211 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDT1Q9H211 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.28■□□□□ 0.84
CDT1Q9H211 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDT1Q9H211 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.28■□□□□ 0.84
CDT1Q9H211 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.28■□□□□ 0.84
CDT1Q9H211 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
CDT1Q9H211 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDT1Q9H211 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDT1Q9H211 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CDT1Q9H211 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDT1Q9H211 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDT1Q9H211 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDT1Q9H211 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CDT1Q9H211 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDT1Q9H211 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDT1Q9H211 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDT1Q9H211 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDT1Q9H211 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.27■□□□□ 0.84
CDT1Q9H211 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDT1Q9H211 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.27■□□□□ 0.84
CDT1Q9H211 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDT1Q9H211 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDT1Q9H211 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.27■□□□□ 0.84
CDT1Q9H211 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDT1Q9H211 AC034232.1-201ENST00000506026 1064 ntBASIC20.27■□□□□ 0.84
CDT1Q9H211 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.27■□□□□ 0.84
CDT1Q9H211 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CDT1Q9H211 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.27■□□□□ 0.84
CDT1Q9H211 AC104390.1-201ENST00000555663 520 ntBASIC20.27■□□□□ 0.84
CDT1Q9H211 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.27■□□□□ 0.84
CDT1Q9H211 AL157888.1-201ENST00000631930 593 ntBASIC20.27■□□□□ 0.84
CDT1Q9H211 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.27■□□□□ 0.84
CDT1Q9H211 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDT1Q9H211 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDT1Q9H211 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms