Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC15.77■□□□□ 0.12
FOXC2Q99958 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FOXC2Q99958 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXC2Q99958 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXC2Q99958 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
FOXC2Q99958 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
FOXC2Q99958 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FOXC2Q99958 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.77■□□□□ 0.12
FOXC2Q99958 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXC2Q99958 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXC2Q99958 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
FOXC2Q99958 RNF165-205ENST00000588679 2904 ntBASIC15.77■□□□□ 0.12
FOXC2Q99958 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
FOXC2Q99958 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FOXC2Q99958 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXC2Q99958 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXC2Q99958 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXC2Q99958 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FOXC2Q99958 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.77■□□□□ 0.12
FOXC2Q99958 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.77■□□□□ 0.12
FOXC2Q99958 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.77■□□□□ 0.12
FOXC2Q99958 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
FOXC2Q99958 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXC2Q99958 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.77■□□□□ 0.12
FOXC2Q99958 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FOXC2Q99958 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.77■□□□□ 0.12
FOXC2Q99958 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.77■□□□□ 0.12
FOXC2Q99958 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXC2Q99958 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
FOXC2Q99958 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
FOXC2Q99958 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FOXC2Q99958 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FOXC2Q99958 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
FOXC2Q99958 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
FOXC2Q99958 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC15.77■□□□□ 0.11
FOXC2Q99958 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
FOXC2Q99958 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXC2Q99958 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXC2Q99958 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXC2Q99958 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
FOXC2Q99958 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
FOXC2Q99958 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.76■□□□□ 0.11
FOXC2Q99958 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXC2Q99958 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXC2Q99958 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.76■□□□□ 0.11
FOXC2Q99958 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXC2Q99958 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.76■□□□□ 0.11
FOXC2Q99958 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.76■□□□□ 0.11
FOXC2Q99958 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXC2Q99958 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXC2Q99958 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXC2Q99958 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXC2Q99958 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
FOXC2Q99958 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
FOXC2Q99958 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.76■□□□□ 0.11
FOXC2Q99958 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
FOXC2Q99958 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXC2Q99958 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXC2Q99958 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
FOXC2Q99958 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXC2Q99958 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXC2Q99958 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXC2Q99958 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXC2Q99958 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXC2Q99958 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXC2Q99958 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXC2Q99958 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXC2Q99958 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXC2Q99958 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXC2Q99958 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXC2Q99958 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXC2Q99958 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXC2Q99958 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXC2Q99958 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
FOXC2Q99958 AC005104.2-201ENST00000427818 678 ntBASIC15.75■□□□□ 0.11
FOXC2Q99958 GUSBP12-201ENST00000513727 720 ntBASIC15.75■□□□□ 0.11
FOXC2Q99958 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.75■□□□□ 0.11
FOXC2Q99958 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXC2Q99958 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXC2Q99958 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXC2Q99958 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
FOXC2Q99958 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXC2Q99958 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.75■□□□□ 0.11
FOXC2Q99958 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
FOXC2Q99958 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXC2Q99958 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXC2Q99958 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXC2Q99958 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
FOXC2Q99958 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXC2Q99958 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXC2Q99958 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.75■□□□□ 0.11
FOXC2Q99958 KRT8P7-201ENST00000533003 1432 ntBASIC15.75■□□□□ 0.11
FOXC2Q99958 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXC2Q99958 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
FOXC2Q99958 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXC2Q99958 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
FOXC2Q99958 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
FOXC2Q99958 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXC2Q99958 NSUN5P1-202ENST00000421140 1535 ntBASIC15.74■□□□□ 0.11
FOXC2Q99958 NSUN5P2-203ENST00000457352 1529 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms