Protein–RNA interactions for Protein: Q99954

SMR3A, Submaxillary gland androgen-regulated protein 3A, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMR3AQ99954 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SMR3AQ99954 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMR3AQ99954 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMR3AQ99954 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SMR3AQ99954 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMR3AQ99954 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMR3AQ99954 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMR3AQ99954 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.21■□□□□ 0.03
SMR3AQ99954 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SMR3AQ99954 RCN1P2-201ENST00000398357 915 ntBASIC15.21■□□□□ 0.03
SMR3AQ99954 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
SMR3AQ99954 METTL21AP1-201ENST00000438852 635 ntBASIC15.21■□□□□ 0.03
SMR3AQ99954 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
SMR3AQ99954 AL596442.2-201ENST00000610240 980 ntBASIC15.21■□□□□ 0.03
SMR3AQ99954 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.21■□□□□ 0.03
SMR3AQ99954 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SMR3AQ99954 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMR3AQ99954 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.21■□□□□ 0.03
SMR3AQ99954 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SMR3AQ99954 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SMR3AQ99954 RCC2P3-201ENST00000418112 1537 ntBASIC15.21■□□□□ 0.03
SMR3AQ99954 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
SMR3AQ99954 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SMR3AQ99954 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMR3AQ99954 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMR3AQ99954 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.2■□□□□ 0.02
SMR3AQ99954 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.2■□□□□ 0.02
SMR3AQ99954 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SMR3AQ99954 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.2■□□□□ 0.02
SMR3AQ99954 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMR3AQ99954 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SMR3AQ99954 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC15.2■□□□□ 0.02
SMR3AQ99954 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMR3AQ99954 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SMR3AQ99954 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.2■□□□□ 0.02
SMR3AQ99954 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMR3AQ99954 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMR3AQ99954 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMR3AQ99954 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMR3AQ99954 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
SMR3AQ99954 RPS2P1-201ENST00000434010 821 ntBASIC15.2■□□□□ 0.02
SMR3AQ99954 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.2■□□□□ 0.02
SMR3AQ99954 AL591424.1-201ENST00000442569 1213 ntBASIC15.2■□□□□ 0.02
SMR3AQ99954 DNAJB3-201ENST00000446806 729 ntBASIC15.2■□□□□ 0.02
SMR3AQ99954 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.2■□□□□ 0.02
SMR3AQ99954 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.2■□□□□ 0.02
SMR3AQ99954 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SMR3AQ99954 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.2■□□□□ 0.02
SMR3AQ99954 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
SMR3AQ99954 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMR3AQ99954 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMR3AQ99954 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMR3AQ99954 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMR3AQ99954 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMR3AQ99954 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.2■□□□□ 0.02
SMR3AQ99954 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMR3AQ99954 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SMR3AQ99954 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMR3AQ99954 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMR3AQ99954 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMR3AQ99954 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SMR3AQ99954 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
SMR3AQ99954 HOXB1-202ENST00000577092 1414 ntBASIC15.19■□□□□ 0.02
SMR3AQ99954 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMR3AQ99954 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.19■□□□□ 0.02
SMR3AQ99954 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMR3AQ99954 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMR3AQ99954 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SMR3AQ99954 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMR3AQ99954 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.19■□□□□ 0.02
SMR3AQ99954 AC244107.1-201ENST00000442033 332 ntBASIC15.19■□□□□ 0.02
SMR3AQ99954 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.19■□□□□ 0.02
SMR3AQ99954 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.19■□□□□ 0.02
SMR3AQ99954 AC012640.2-201ENST00000561606 901 ntBASIC15.19■□□□□ 0.02
SMR3AQ99954 AC040169.1-201ENST00000565382 521 ntBASIC15.19■□□□□ 0.02
SMR3AQ99954 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.19■□□□□ 0.02
SMR3AQ99954 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.19■□□□□ 0.02
SMR3AQ99954 AP001269.4-201ENST00000609611 512 ntBASIC15.19■□□□□ 0.02
SMR3AQ99954 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.19■□□□□ 0.02
SMR3AQ99954 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMR3AQ99954 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SMR3AQ99954 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.19■□□□□ 0.02
SMR3AQ99954 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SMR3AQ99954 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SMR3AQ99954 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMR3AQ99954 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SMR3AQ99954 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMR3AQ99954 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMR3AQ99954 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMR3AQ99954 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMR3AQ99954 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMR3AQ99954 KRT8P7-201ENST00000533003 1432 ntBASIC15.18■□□□□ 0.02
SMR3AQ99954 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SMR3AQ99954 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMR3AQ99954 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SMR3AQ99954 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMR3AQ99954 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMR3AQ99954 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMR3AQ99954 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMR3AQ99954 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms