Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 TREX1-205ENST00000625293 1783 ntBASIC16.9■□□□□ 0.3
SPENQ96T58 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SPENQ96T58 AL512353.2-201ENST00000448759 1962 ntBASIC16.9■□□□□ 0.3
SPENQ96T58 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.9■□□□□ 0.3
SPENQ96T58 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPENQ96T58 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SPENQ96T58 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.9■□□□□ 0.3
SPENQ96T58 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SPENQ96T58 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SPENQ96T58 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPENQ96T58 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
SPENQ96T58 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.9■□□□□ 0.3
SPENQ96T58 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SPENQ96T58 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.9■□□□□ 0.3
SPENQ96T58 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.9■□□□□ 0.3
SPENQ96T58 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.9■□□□□ 0.3
SPENQ96T58 AL121772.3-201ENST00000610840 674 ntBASIC16.9■□□□□ 0.3
SPENQ96T58 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SPENQ96T58 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
SPENQ96T58 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.89■□□□□ 0.3
SPENQ96T58 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.89■□□□□ 0.29
SPENQ96T58 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.89■□□□□ 0.29
SPENQ96T58 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPENQ96T58 AL590627.1-203ENST00000421194 1026 ntBASIC16.89■□□□□ 0.29
SPENQ96T58 MCCD1P1-208ENST00000445732 328 ntBASIC16.89■□□□□ 0.29
SPENQ96T58 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPENQ96T58 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPENQ96T58 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPENQ96T58 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.89■□□□□ 0.29
SPENQ96T58 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SPENQ96T58 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.89■□□□□ 0.29
SPENQ96T58 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.89■□□□□ 0.29
SPENQ96T58 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.89■□□□□ 0.29
SPENQ96T58 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPENQ96T58 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPENQ96T58 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SPENQ96T58 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.89■□□□□ 0.29
SPENQ96T58 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPENQ96T58 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPENQ96T58 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPENQ96T58 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SPENQ96T58 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPENQ96T58 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPENQ96T58 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.89■□□□□ 0.29
SPENQ96T58 KRT18P67-201ENST00000432816 1264 ntBASIC16.89■□□□□ 0.29
SPENQ96T58 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.89■□□□□ 0.29
SPENQ96T58 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPENQ96T58 AL390719.2-201ENST00000606993 987 ntBASIC16.89■□□□□ 0.29
SPENQ96T58 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPENQ96T58 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPENQ96T58 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPENQ96T58 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SPENQ96T58 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SPENQ96T58 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.88■□□□□ 0.29
SPENQ96T58 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.88■□□□□ 0.29
SPENQ96T58 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.88■□□□□ 0.29
SPENQ96T58 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.88■□□□□ 0.29
SPENQ96T58 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPENQ96T58 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPENQ96T58 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.88■□□□□ 0.29
SPENQ96T58 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.88■□□□□ 0.29
SPENQ96T58 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.88■□□□□ 0.29
SPENQ96T58 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SPENQ96T58 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.88■□□□□ 0.29
SPENQ96T58 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.88■□□□□ 0.29
SPENQ96T58 AL773604.1-201ENST00000617417 272 ntBASIC16.88■□□□□ 0.29
SPENQ96T58 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPENQ96T58 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.88■□□□□ 0.29
SPENQ96T58 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPENQ96T58 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.88■□□□□ 0.29
SPENQ96T58 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.88■□□□□ 0.29
SPENQ96T58 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPENQ96T58 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.88■□□□□ 0.29
SPENQ96T58 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.88■□□□□ 0.29
SPENQ96T58 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.88■□□□□ 0.29
SPENQ96T58 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.88■□□□□ 0.29
SPENQ96T58 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.88■□□□□ 0.29
SPENQ96T58 AC092865.5-201ENST00000545435 363 ntBASIC16.88■□□□□ 0.29
SPENQ96T58 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.88■□□□□ 0.29
SPENQ96T58 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SPENQ96T58 AC148477.8-201ENST00000624298 468 ntBASIC16.88■□□□□ 0.29
SPENQ96T58 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SPENQ96T58 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.87■□□□□ 0.29
SPENQ96T58 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPENQ96T58 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SPENQ96T58 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPENQ96T58 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPENQ96T58 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.87■□□□□ 0.29
SPENQ96T58 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.87■□□□□ 0.29
SPENQ96T58 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.87■□□□□ 0.29
SPENQ96T58 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SPENQ96T58 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPENQ96T58 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.87■□□□□ 0.29
SPENQ96T58 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPENQ96T58 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPENQ96T58 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPENQ96T58 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPENQ96T58 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.87■□□□□ 0.29
SPENQ96T58 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SPENQ96T58 AL592071.1-201ENST00000611956 408 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms