Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDK5RAP1Q96SZ6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDK5RAP1Q96SZ6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDK5RAP1Q96SZ6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.45■□□□□ 0.7
CDK5RAP1Q96SZ6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDK5RAP1Q96SZ6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDK5RAP1Q96SZ6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDK5RAP1Q96SZ6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CDK5RAP1Q96SZ6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDK5RAP1Q96SZ6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.45■□□□□ 0.7
CDK5RAP1Q96SZ6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.45■□□□□ 0.7
CDK5RAP1Q96SZ6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CDK5RAP1Q96SZ6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.45■□□□□ 0.7
CDK5RAP1Q96SZ6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.45■□□□□ 0.7
CDK5RAP1Q96SZ6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDK5RAP1Q96SZ6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDK5RAP1Q96SZ6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDK5RAP1Q96SZ6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.45■□□□□ 0.7
CDK5RAP1Q96SZ6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDK5RAP1Q96SZ6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDK5RAP1Q96SZ6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CDK5RAP1Q96SZ6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.45■□□□□ 0.7
CDK5RAP1Q96SZ6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.45■□□□□ 0.7
CDK5RAP1Q96SZ6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDK5RAP1Q96SZ6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 SEC1P-202ENST00000473944 940 ntBASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 MIR3180-4-201ENST00000582223 153 ntBASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.44■□□□□ 0.7
CDK5RAP1Q96SZ6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 AL671277.2-201ENST00000458060 996 ntBASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 RASA4DP-201ENST00000460726 1199 ntBASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 AC104390.1-201ENST00000555663 520 ntBASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 AC009065.1-201ENST00000564055 1225 ntBASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 AL121956.5-201ENST00000625261 221 ntBASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.43■□□□□ 0.7
CDK5RAP1Q96SZ6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP1Q96SZ6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CDK5RAP1Q96SZ6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CDK5RAP1Q96SZ6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CDK5RAP1Q96SZ6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP1Q96SZ6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP1Q96SZ6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP1Q96SZ6 AL031133.1-201ENST00000406807 723 ntBASIC19.42■□□□□ 0.7
CDK5RAP1Q96SZ6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP1Q96SZ6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.42■□□□□ 0.7
CDK5RAP1Q96SZ6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.42■□□□□ 0.7
CDK5RAP1Q96SZ6 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.42■□□□□ 0.7
CDK5RAP1Q96SZ6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
CDK5RAP1Q96SZ6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.42■□□□□ 0.7
CDK5RAP1Q96SZ6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK5RAP1Q96SZ6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms