Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 COX11P1-201ENST00000489116 835 ntBASIC19.32■□□□□ 0.68
RPRD1AQ96P16 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 AC139887.4-201ENST00000607877 719 ntBASIC19.32■□□□□ 0.68
RPRD1AQ96P16 AC006011.2-201ENST00000621313 1158 ntBASIC19.32■□□□□ 0.68
RPRD1AQ96P16 AC068587.9-201ENST00000641814 219 ntBASIC19.32■□□□□ 0.68
RPRD1AQ96P16 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.32■□□□□ 0.68
RPRD1AQ96P16 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPRD1AQ96P16 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RPRD1AQ96P16 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.31■□□□□ 0.68
RPRD1AQ96P16 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.31■□□□□ 0.68
RPRD1AQ96P16 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPRD1AQ96P16 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPRD1AQ96P16 HEIH-201ENST00000623091 1652 ntBASIC19.31■□□□□ 0.68
RPRD1AQ96P16 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPRD1AQ96P16 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPRD1AQ96P16 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.31■□□□□ 0.68
RPRD1AQ96P16 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.31■□□□□ 0.68
RPRD1AQ96P16 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.31■□□□□ 0.68
RPRD1AQ96P16 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.31■□□□□ 0.68
RPRD1AQ96P16 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
RPRD1AQ96P16 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.31■□□□□ 0.68
RPRD1AQ96P16 AC083906.6-201ENST00000641366 219 ntBASIC19.31■□□□□ 0.68
RPRD1AQ96P16 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.31■□□□□ 0.68
RPRD1AQ96P16 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
RPRD1AQ96P16 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPRD1AQ96P16 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPRD1AQ96P16 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPRD1AQ96P16 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPRD1AQ96P16 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPRD1AQ96P16 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPRD1AQ96P16 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPRD1AQ96P16 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.3■□□□□ 0.68
RPRD1AQ96P16 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.3■□□□□ 0.68
RPRD1AQ96P16 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.3■□□□□ 0.68
RPRD1AQ96P16 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPRD1AQ96P16 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.3■□□□□ 0.68
RPRD1AQ96P16 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.3■□□□□ 0.68
RPRD1AQ96P16 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RPRD1AQ96P16 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RPRD1AQ96P16 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.3■□□□□ 0.68
RPRD1AQ96P16 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPRD1AQ96P16 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPRD1AQ96P16 AP000523.1-201ENST00000398242 1049 ntBASIC19.3■□□□□ 0.68
RPRD1AQ96P16 AC117947.1-201ENST00000427448 529 ntBASIC19.3■□□□□ 0.68
RPRD1AQ96P16 AC104076.2-201ENST00000448912 469 ntBASIC19.3■□□□□ 0.68
RPRD1AQ96P16 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RPRD1AQ96P16 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.3■□□□□ 0.68
RPRD1AQ96P16 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPRD1AQ96P16 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RPRD1AQ96P16 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPRD1AQ96P16 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPRD1AQ96P16 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RPRD1AQ96P16 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPRD1AQ96P16 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RPRD1AQ96P16 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.29■□□□□ 0.68
RPRD1AQ96P16 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPRD1AQ96P16 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.29■□□□□ 0.68
RPRD1AQ96P16 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPRD1AQ96P16 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPRD1AQ96P16 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPRD1AQ96P16 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPRD1AQ96P16 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPRD1AQ96P16 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPRD1AQ96P16 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.29■□□□□ 0.68
RPRD1AQ96P16 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RPRD1AQ96P16 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
RPRD1AQ96P16 AK4P3-201ENST00000418260 669 ntBASIC19.29■□□□□ 0.68
RPRD1AQ96P16 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.29■□□□□ 0.68
RPRD1AQ96P16 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.29■□□□□ 0.68
RPRD1AQ96P16 NEK4P2-201ENST00000580004 1012 ntBASIC19.29■□□□□ 0.68
RPRD1AQ96P16 AC140113.3-201ENST00000605663 199 ntBASIC19.29■□□□□ 0.68
RPRD1AQ96P16 AL023973.1-201ENST00000624619 620 ntBASIC19.29■□□□□ 0.68
RPRD1AQ96P16 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPRD1AQ96P16 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPRD1AQ96P16 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RPRD1AQ96P16 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RPRD1AQ96P16 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPRD1AQ96P16 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPRD1AQ96P16 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPRD1AQ96P16 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms