Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPGRIP1Q96KN7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPGRIP1Q96KN7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPGRIP1Q96KN7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPGRIP1Q96KN7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.66■□□□□ 0.9
RPGRIP1Q96KN7 AL161938.1-201ENST00000569833 2180 ntBASIC20.66■□□□□ 0.9
RPGRIP1Q96KN7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPGRIP1Q96KN7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.66■□□□□ 0.9
RPGRIP1Q96KN7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RPGRIP1Q96KN7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 AC006333.2-201ENST00000607957 2099 ntBASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 AC011506.1-201ENST00000474329 610 ntBASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 AC026271.3-201ENST00000571884 352 ntBASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 DGCR10-201ENST00000609839 495 ntBASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RPGRIP1Q96KN7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
RPGRIP1Q96KN7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 AC091390.4-202ENST00000476426 537 ntBASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 MYC-208ENST00000641036 567 ntBASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
RPGRIP1Q96KN7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 RNF152P1-201ENST00000397754 604 ntBASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 FAM8A6P-201ENST00000407496 1135 ntBASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 AC009947.2-201ENST00000444014 672 ntBASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 AL445675.2-201ENST00000620291 557 ntBASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 AP000550.4-202ENST00000639755 178 ntBASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPGRIP1Q96KN7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms