Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM2Q96JY6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM2Q96JY6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM2Q96JY6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM2Q96JY6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC20.73■□□□□ 0.91
PDLIM2Q96JY6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PDLIM2Q96JY6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM2Q96JY6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM2Q96JY6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.73■□□□□ 0.91
PDLIM2Q96JY6 KRT19P1-201ENST00000405746 1186 ntBASIC20.73■□□□□ 0.91
PDLIM2Q96JY6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.73■□□□□ 0.91
PDLIM2Q96JY6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.73■□□□□ 0.91
PDLIM2Q96JY6 AC142381.2-201ENST00000566120 298 ntBASIC20.73■□□□□ 0.91
PDLIM2Q96JY6 MYC-208ENST00000641036 567 ntBASIC20.73■□□□□ 0.91
PDLIM2Q96JY6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM2Q96JY6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM2Q96JY6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM2Q96JY6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM2Q96JY6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM2Q96JY6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.73■□□□□ 0.91
PDLIM2Q96JY6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.73■□□□□ 0.91
PDLIM2Q96JY6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 AC112777.1-201ENST00000540175 1423 ntBASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 YBX1P10-201ENST00000444752 975 ntBASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
PDLIM2Q96JY6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM2Q96JY6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM2Q96JY6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM2Q96JY6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM2Q96JY6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM2Q96JY6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM2Q96JY6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PDLIM2Q96JY6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM2Q96JY6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PDLIM2Q96JY6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM2Q96JY6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM2Q96JY6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM2Q96JY6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.71■□□□□ 0.91
PDLIM2Q96JY6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.71■□□□□ 0.91
PDLIM2Q96JY6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM2Q96JY6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PDLIM2Q96JY6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM2Q96JY6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.71■□□□□ 0.91
PDLIM2Q96JY6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM2Q96JY6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM2Q96JY6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
PDLIM2Q96JY6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.71■□□□□ 0.91
PDLIM2Q96JY6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM2Q96JY6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM2Q96JY6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM2Q96JY6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM2Q96JY6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM2Q96JY6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM2Q96JY6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM2Q96JY6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM2Q96JY6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM2Q96JY6 TSPY23P-201ENST00000440136 739 ntBASIC20.7■□□□□ 0.9
PDLIM2Q96JY6 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.7■□□□□ 0.9
PDLIM2Q96JY6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.7■□□□□ 0.9
PDLIM2Q96JY6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.7■□□□□ 0.9
PDLIM2Q96JY6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.7■□□□□ 0.9
PDLIM2Q96JY6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM2Q96JY6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM2Q96JY6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM2Q96JY6 AC011270.2-201ENST00000624293 2550 ntBASIC20.7■□□□□ 0.9
PDLIM2Q96JY6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM2Q96JY6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.7■□□□□ 0.9
PDLIM2Q96JY6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PDLIM2Q96JY6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM2Q96JY6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM2Q96JY6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM2Q96JY6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PDLIM2Q96JY6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms