Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH3Q96II8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH3Q96II8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH3Q96II8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
LRCH3Q96II8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH3Q96II8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LRCH3Q96II8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH3Q96II8 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH3Q96II8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH3Q96II8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.26■□□□□ 0.83
LRCH3Q96II8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
LRCH3Q96II8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.26■□□□□ 0.83
LRCH3Q96II8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.26■□□□□ 0.83
LRCH3Q96II8 IGHV3-22-201ENST00000520721 359 ntBASIC20.26■□□□□ 0.83
LRCH3Q96II8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.26■□□□□ 0.83
LRCH3Q96II8 AC034105.1-201ENST00000563488 319 ntBASIC20.26■□□□□ 0.83
LRCH3Q96II8 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.26■□□□□ 0.83
LRCH3Q96II8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
LRCH3Q96II8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.26■□□□□ 0.83
LRCH3Q96II8 AL591684.3-201ENST00000605187 298 ntBASIC20.26■□□□□ 0.83
LRCH3Q96II8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.26■□□□□ 0.83
LRCH3Q96II8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH3Q96II8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
LRCH3Q96II8 FEM1AP1-201ENST00000431297 1995 ntBASIC20.26■□□□□ 0.83
LRCH3Q96II8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.26■□□□□ 0.83
LRCH3Q96II8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH3Q96II8 AC092667.1-201ENST00000434301 2586 ntBASIC20.26■□□□□ 0.83
LRCH3Q96II8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH3Q96II8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH3Q96II8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.26■□□□□ 0.83
LRCH3Q96II8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH3Q96II8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH3Q96II8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH3Q96II8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.25■□□□□ 0.83
LRCH3Q96II8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.25■□□□□ 0.83
LRCH3Q96II8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH3Q96II8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.25■□□□□ 0.83
LRCH3Q96II8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH3Q96II8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH3Q96II8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH3Q96II8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.25■□□□□ 0.83
LRCH3Q96II8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH3Q96II8 AL591424.1-201ENST00000442569 1213 ntBASIC20.25■□□□□ 0.83
LRCH3Q96II8 MINOS1P3-201ENST00000457048 203 ntBASIC20.25■□□□□ 0.83
LRCH3Q96II8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
LRCH3Q96II8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH3Q96II8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
LRCH3Q96II8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH3Q96II8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH3Q96II8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.25■□□□□ 0.83
LRCH3Q96II8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH3Q96II8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.25■□□□□ 0.83
LRCH3Q96II8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH3Q96II8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.25■□□□□ 0.83
LRCH3Q96II8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH3Q96II8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH3Q96II8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH3Q96II8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH3Q96II8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH3Q96II8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.24■□□□□ 0.83
LRCH3Q96II8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.24■□□□□ 0.83
LRCH3Q96II8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
LRCH3Q96II8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LRCH3Q96II8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
LRCH3Q96II8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.24■□□□□ 0.83
LRCH3Q96II8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.24■□□□□ 0.83
LRCH3Q96II8 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.24■□□□□ 0.83
LRCH3Q96II8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.24■□□□□ 0.83
LRCH3Q96II8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.24■□□□□ 0.83
LRCH3Q96II8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.24■□□□□ 0.83
LRCH3Q96II8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
LRCH3Q96II8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH3Q96II8 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH3Q96II8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH3Q96II8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH3Q96II8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH3Q96II8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.24■□□□□ 0.83
LRCH3Q96II8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH3Q96II8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
LRCH3Q96II8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.24■□□□□ 0.83
LRCH3Q96II8 AL049796.1-201ENST00000565336 1766 ntBASIC20.23■□□□□ 0.83
LRCH3Q96II8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH3Q96II8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH3Q96II8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH3Q96II8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH3Q96II8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.23■□□□□ 0.83
LRCH3Q96II8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH3Q96II8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.23■□□□□ 0.83
LRCH3Q96II8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH3Q96II8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH3Q96II8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH3Q96II8 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.23■□□□□ 0.83
LRCH3Q96II8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH3Q96II8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LRCH3Q96II8 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.23■□□□□ 0.83
LRCH3Q96II8 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.23■□□□□ 0.83
LRCH3Q96II8 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.23■□□□□ 0.83
LRCH3Q96II8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH3Q96II8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH3Q96II8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms