Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.31■□□□□ 0.68
IFT43Q96FT9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFT43Q96FT9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFT43Q96FT9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.31■□□□□ 0.68
IFT43Q96FT9 FP475955.4-201ENST00000623131 1990 ntBASIC19.31■□□□□ 0.68
IFT43Q96FT9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFT43Q96FT9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFT43Q96FT9 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.31■□□□□ 0.68
IFT43Q96FT9 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.31■□□□□ 0.68
IFT43Q96FT9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.31■□□□□ 0.68
IFT43Q96FT9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFT43Q96FT9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
IFT43Q96FT9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
IFT43Q96FT9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFT43Q96FT9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
IFT43Q96FT9 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.3■□□□□ 0.68
IFT43Q96FT9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFT43Q96FT9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFT43Q96FT9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFT43Q96FT9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFT43Q96FT9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFT43Q96FT9 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IFT43Q96FT9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.3■□□□□ 0.68
IFT43Q96FT9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
IFT43Q96FT9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IFT43Q96FT9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IFT43Q96FT9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IFT43Q96FT9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IFT43Q96FT9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
IFT43Q96FT9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.3■□□□□ 0.68
IFT43Q96FT9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.3■□□□□ 0.68
IFT43Q96FT9 AC091390.4-202ENST00000476426 537 ntBASIC19.3■□□□□ 0.68
IFT43Q96FT9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.3■□□□□ 0.68
IFT43Q96FT9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.3■□□□□ 0.68
IFT43Q96FT9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
IFT43Q96FT9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFT43Q96FT9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.3■□□□□ 0.68
IFT43Q96FT9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFT43Q96FT9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFT43Q96FT9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFT43Q96FT9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFT43Q96FT9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
IFT43Q96FT9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IFT43Q96FT9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
IFT43Q96FT9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IFT43Q96FT9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
IFT43Q96FT9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IFT43Q96FT9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
IFT43Q96FT9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.29■□□□□ 0.68
IFT43Q96FT9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.29■□□□□ 0.68
IFT43Q96FT9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.29■□□□□ 0.68
IFT43Q96FT9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.29■□□□□ 0.68
IFT43Q96FT9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
IFT43Q96FT9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.29■□□□□ 0.68
IFT43Q96FT9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
IFT43Q96FT9 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.29■□□□□ 0.68
IFT43Q96FT9 MESTP1-201ENST00000404287 994 ntBASIC19.29■□□□□ 0.68
IFT43Q96FT9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
IFT43Q96FT9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.29■□□□□ 0.68
IFT43Q96FT9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.29■□□□□ 0.68
IFT43Q96FT9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
IFT43Q96FT9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.29■□□□□ 0.68
IFT43Q96FT9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.29■□□□□ 0.68
IFT43Q96FT9 AC010947.1-201ENST00000623454 693 ntBASIC19.29■□□□□ 0.68
IFT43Q96FT9 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.29■□□□□ 0.68
IFT43Q96FT9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.29■□□□□ 0.68
IFT43Q96FT9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.29■□□□□ 0.68
IFT43Q96FT9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.29■□□□□ 0.68
IFT43Q96FT9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.29■□□□□ 0.68
IFT43Q96FT9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
IFT43Q96FT9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IFT43Q96FT9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IFT43Q96FT9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
IFT43Q96FT9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
IFT43Q96FT9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
IFT43Q96FT9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT43Q96FT9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT43Q96FT9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT43Q96FT9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IFT43Q96FT9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
IFT43Q96FT9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT43Q96FT9 FEM1AP3-201ENST00000403722 1741 ntBASIC19.28■□□□□ 0.68
IFT43Q96FT9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.28■□□□□ 0.68
IFT43Q96FT9 AC020763.4-201ENST00000623414 4170 ntBASIC19.28■□□□□ 0.68
IFT43Q96FT9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.28■□□□□ 0.68
IFT43Q96FT9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
IFT43Q96FT9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT43Q96FT9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT43Q96FT9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IFT43Q96FT9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IFT43Q96FT9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
IFT43Q96FT9 AC113347.1-201ENST00000413321 391 ntBASIC19.28■□□□□ 0.68
IFT43Q96FT9 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.28■□□□□ 0.68
IFT43Q96FT9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.28■□□□□ 0.68
IFT43Q96FT9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IFT43Q96FT9 FAM207BP-201ENST00000447172 505 ntBASIC19.28■□□□□ 0.68
IFT43Q96FT9 B3GAT3P1-201ENST00000471720 806 ntBASIC19.28■□□□□ 0.68
IFT43Q96FT9 AC011506.1-201ENST00000474329 610 ntBASIC19.28■□□□□ 0.68
IFT43Q96FT9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.28■□□□□ 0.68
IFT43Q96FT9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms