Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX11Q96FC9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX11Q96FC9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC22.25■■□□□ 1.15
DDX11Q96FC9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.25■■□□□ 1.15
DDX11Q96FC9 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
DDX11Q96FC9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DDX11Q96FC9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
DDX11Q96FC9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX11Q96FC9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.25■■□□□ 1.15
DDX11Q96FC9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX11Q96FC9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX11Q96FC9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX11Q96FC9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX11Q96FC9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC22.24■■□□□ 1.15
DDX11Q96FC9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.24■■□□□ 1.15
DDX11Q96FC9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX11Q96FC9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DDX11Q96FC9 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX11Q96FC9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC22.24■■□□□ 1.15
DDX11Q96FC9 TSPY23P-201ENST00000440136 739 ntBASIC22.24■■□□□ 1.15
DDX11Q96FC9 AC091390.4-202ENST00000476426 537 ntBASIC22.24■■□□□ 1.15
DDX11Q96FC9 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC22.24■■□□□ 1.15
DDX11Q96FC9 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
DDX11Q96FC9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.24■■□□□ 1.15
DDX11Q96FC9 FAM87A-204ENST00000613235 858 ntBASIC22.24■■□□□ 1.15
DDX11Q96FC9 AC116562.4-202ENST00000641738 218 ntBASIC22.24■■□□□ 1.15
DDX11Q96FC9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
DDX11Q96FC9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX11Q96FC9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX11Q96FC9 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC22.24■■□□□ 1.15
DDX11Q96FC9 NEFHP1-201ENST00000412845 2629 ntBASIC22.24■■□□□ 1.15
DDX11Q96FC9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.24■■□□□ 1.15
DDX11Q96FC9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX11Q96FC9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DDX11Q96FC9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX11Q96FC9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX11Q96FC9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX11Q96FC9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC22.23■■□□□ 1.15
DDX11Q96FC9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
DDX11Q96FC9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DDX11Q96FC9 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX11Q96FC9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC22.23■■□□□ 1.15
DDX11Q96FC9 Z85996.1-201ENST00000494644 937 ntBASIC22.23■■□□□ 1.15
DDX11Q96FC9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.23■■□□□ 1.15
DDX11Q96FC9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX11Q96FC9 AC087388.1-201ENST00000571370 1112 ntBASIC22.23■■□□□ 1.15
DDX11Q96FC9 AC006011.2-201ENST00000621313 1158 ntBASIC22.23■■□□□ 1.15
DDX11Q96FC9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX11Q96FC9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC22.23■■□□□ 1.15
DDX11Q96FC9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX11Q96FC9 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DDX11Q96FC9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC22.23■■□□□ 1.15
DDX11Q96FC9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DDX11Q96FC9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX11Q96FC9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.23■■□□□ 1.15
DDX11Q96FC9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX11Q96FC9 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX11Q96FC9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC22.22■■□□□ 1.15
DDX11Q96FC9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC22.22■■□□□ 1.15
DDX11Q96FC9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC22.22■■□□□ 1.15
DDX11Q96FC9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
DDX11Q96FC9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX11Q96FC9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX11Q96FC9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX11Q96FC9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX11Q96FC9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.22■■□□□ 1.15
DDX11Q96FC9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX11Q96FC9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX11Q96FC9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
DDX11Q96FC9 HMGA1P5-201ENST00000412453 271 ntBASIC22.22■■□□□ 1.15
DDX11Q96FC9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC22.22■■□□□ 1.15
DDX11Q96FC9 CCR12P-201ENST00000446203 998 ntBASIC22.22■■□□□ 1.15
DDX11Q96FC9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
DDX11Q96FC9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.22■■□□□ 1.15
DDX11Q96FC9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC22.22■■□□□ 1.15
DDX11Q96FC9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX11Q96FC9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX11Q96FC9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC22.22■■□□□ 1.15
DDX11Q96FC9 AC096733.2-201ENST00000609937 1394 ntBASIC22.22■■□□□ 1.15
DDX11Q96FC9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX11Q96FC9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
DDX11Q96FC9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX11Q96FC9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
DDX11Q96FC9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
DDX11Q96FC9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX11Q96FC9 GAS2L1P1-201ENST00000420145 1480 ntBASIC22.22■■□□□ 1.15
DDX11Q96FC9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC22.21■■□□□ 1.15
DDX11Q96FC9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX11Q96FC9 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
DDX11Q96FC9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX11Q96FC9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX11Q96FC9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX11Q96FC9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX11Q96FC9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DDX11Q96FC9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC22.21■■□□□ 1.15
DDX11Q96FC9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC22.21■■□□□ 1.15
DDX11Q96FC9 BX664615.1-201ENST00000443558 458 ntBASIC22.21■■□□□ 1.15
DDX11Q96FC9 WWOX-216ENST00000569818 525 ntBASIC22.21■■□□□ 1.15
DDX11Q96FC9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC22.21■■□□□ 1.15
DDX11Q96FC9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms