Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP6NLQ92738 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP6NLQ92738 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
USP6NLQ92738 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP6NLQ92738 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.21■□□□□ 0.99
USP6NLQ92738 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.21■□□□□ 0.99
USP6NLQ92738 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP6NLQ92738 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP6NLQ92738 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP6NLQ92738 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP6NLQ92738 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP6NLQ92738 AC092667.1-201ENST00000434301 2586 ntBASIC21.21■□□□□ 0.99
USP6NLQ92738 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP6NLQ92738 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP6NLQ92738 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP6NLQ92738 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP6NLQ92738 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP6NLQ92738 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP6NLQ92738 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
USP6NLQ92738 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP6NLQ92738 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
USP6NLQ92738 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
USP6NLQ92738 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP6NLQ92738 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.2■□□□□ 0.98
USP6NLQ92738 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
USP6NLQ92738 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP6NLQ92738 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP6NLQ92738 TSPY12P-201ENST00000421279 868 ntBASIC21.2■□□□□ 0.98
USP6NLQ92738 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.2■□□□□ 0.98
USP6NLQ92738 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.2■□□□□ 0.98
USP6NLQ92738 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.2■□□□□ 0.98
USP6NLQ92738 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.2■□□□□ 0.98
USP6NLQ92738 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
USP6NLQ92738 GPR32P1-201ENST00000601788 811 ntBASIC21.2■□□□□ 0.98
USP6NLQ92738 AC099336.1-202ENST00000602961 463 ntBASIC21.2■□□□□ 0.98
USP6NLQ92738 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP6NLQ92738 BX640515.1-201ENST00000617215 977 ntBASIC21.2■□□□□ 0.98
USP6NLQ92738 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.2■□□□□ 0.98
USP6NLQ92738 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP6NLQ92738 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP6NLQ92738 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP6NLQ92738 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP6NLQ92738 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP6NLQ92738 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
USP6NLQ92738 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP6NLQ92738 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.2■□□□□ 0.98
USP6NLQ92738 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP6NLQ92738 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.2■□□□□ 0.98
USP6NLQ92738 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP6NLQ92738 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP6NLQ92738 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP6NLQ92738 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP6NLQ92738 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.19■□□□□ 0.98
USP6NLQ92738 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
USP6NLQ92738 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
USP6NLQ92738 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP6NLQ92738 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP6NLQ92738 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.19■□□□□ 0.98
USP6NLQ92738 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
USP6NLQ92738 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.19■□□□□ 0.98
USP6NLQ92738 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6NLQ92738 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.19■□□□□ 0.98
USP6NLQ92738 TEX21P-204ENST00000641479 1693 ntBASIC21.19■□□□□ 0.98
USP6NLQ92738 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6NLQ92738 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6NLQ92738 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6NLQ92738 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6NLQ92738 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.19■□□□□ 0.98
USP6NLQ92738 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP6NLQ92738 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.19■□□□□ 0.98
USP6NLQ92738 IGHGP-201ENST00000390555 1178 ntBASIC21.19■□□□□ 0.98
USP6NLQ92738 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.19■□□□□ 0.98
USP6NLQ92738 AC079776.4-201ENST00000511039 504 ntBASIC21.19■□□□□ 0.98
USP6NLQ92738 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6NLQ92738 MIR3180-4-201ENST00000582223 153 ntBASIC21.19■□□□□ 0.98
USP6NLQ92738 Z69720.1-201ENST00000601483 472 ntBASIC21.19■□□□□ 0.98
USP6NLQ92738 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.19■□□□□ 0.98
USP6NLQ92738 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP6NLQ92738 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6NLQ92738 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
USP6NLQ92738 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6NLQ92738 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6NLQ92738 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6NLQ92738 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6NLQ92738 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
USP6NLQ92738 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP6NLQ92738 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6NLQ92738 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6NLQ92738 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6NLQ92738 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6NLQ92738 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.18■□□□□ 0.98
USP6NLQ92738 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP6NLQ92738 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP6NLQ92738 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP6NLQ92738 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP6NLQ92738 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.18■□□□□ 0.98
USP6NLQ92738 RNA5SP419-201ENST00000515908 135 ntBASIC21.18■□□□□ 0.98
USP6NLQ92738 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP6NLQ92738 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.18■□□□□ 0.98
USP6NLQ92738 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms