Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
DDX1Q92499 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX1Q92499 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX1Q92499 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDX1Q92499 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX1Q92499 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.98■□□□□ 0.79
DDX1Q92499 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.98■□□□□ 0.79
DDX1Q92499 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
DDX1Q92499 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDX1Q92499 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX1Q92499 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.97■□□□□ 0.79
DDX1Q92499 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DDX1Q92499 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.97■□□□□ 0.79
DDX1Q92499 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
DDX1Q92499 LINC01568-207ENST00000641790 1380 ntBASIC19.97■□□□□ 0.79
DDX1Q92499 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
DDX1Q92499 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.97■□□□□ 0.79
DDX1Q92499 TPM4P1-201ENST00000436100 807 ntBASIC19.97■□□□□ 0.79
DDX1Q92499 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX1Q92499 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.97■□□□□ 0.79
DDX1Q92499 AP005242.2-201ENST00000580065 1175 ntBASIC19.97■□□□□ 0.79
DDX1Q92499 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.97■□□□□ 0.79
DDX1Q92499 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.97■□□□□ 0.79
DDX1Q92499 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DDX1Q92499 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DDX1Q92499 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.97■□□□□ 0.79
DDX1Q92499 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX1Q92499 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
DDX1Q92499 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX1Q92499 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX1Q92499 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX1Q92499 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX1Q92499 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX1Q92499 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.96■□□□□ 0.79
DDX1Q92499 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
DDX1Q92499 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.96■□□□□ 0.79
DDX1Q92499 AC126763.1-201ENST00000552015 2118 ntBASIC19.96■□□□□ 0.79
DDX1Q92499 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX1Q92499 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX1Q92499 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX1Q92499 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX1Q92499 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
DDX1Q92499 UNC93B2-201ENST00000285383 730 ntBASIC19.96■□□□□ 0.79
DDX1Q92499 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
DDX1Q92499 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.96■□□□□ 0.79
DDX1Q92499 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.96■□□□□ 0.79
DDX1Q92499 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
DDX1Q92499 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.96■□□□□ 0.79
DDX1Q92499 RBM17P1-201ENST00000453646 1190 ntBASIC19.96■□□□□ 0.79
DDX1Q92499 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.96■□□□□ 0.79
DDX1Q92499 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX1Q92499 AC079598.2-202ENST00000546624 1451 ntBASIC19.96■□□□□ 0.79
DDX1Q92499 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX1Q92499 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.96■□□□□ 0.79
DDX1Q92499 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX1Q92499 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.96■□□□□ 0.79
DDX1Q92499 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
DDX1Q92499 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX1Q92499 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX1Q92499 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX1Q92499 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
DDX1Q92499 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX1Q92499 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX1Q92499 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX1Q92499 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX1Q92499 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.79
DDX1Q92499 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX1Q92499 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DDX1Q92499 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX1Q92499 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX1Q92499 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX1Q92499 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX1Q92499 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX1Q92499 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX1Q92499 AL109659.2-201ENST00000606809 1674 ntBASIC19.95■□□□□ 0.78
DDX1Q92499 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.95■□□□□ 0.78
DDX1Q92499 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX1Q92499 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX1Q92499 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX1Q92499 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.95■□□□□ 0.78
DDX1Q92499 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DDX1Q92499 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.95■□□□□ 0.78
DDX1Q92499 CRYGFP-201ENST00000418459 633 ntBASIC19.95■□□□□ 0.78
DDX1Q92499 CA15P1-201ENST00000481698 905 ntBASIC19.95■□□□□ 0.78
DDX1Q92499 DUX4L26-201ENST00000489078 1255 ntBASIC19.95■□□□□ 0.78
DDX1Q92499 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.95■□□□□ 0.78
DDX1Q92499 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.95■□□□□ 0.78
DDX1Q92499 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.95■□□□□ 0.78
DDX1Q92499 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
DDX1Q92499 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX1Q92499 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX1Q92499 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DDX1Q92499 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.95■□□□□ 0.78
DDX1Q92499 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.95■□□□□ 0.78
DDX1Q92499 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
DDX1Q92499 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX1Q92499 AC008556.1-201ENST00000610908 2040 ntBASIC19.95■□□□□ 0.78
DDX1Q92499 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DDX1Q92499 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX1Q92499 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms