Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.32■□□□□ 0.52
ATL1Q8WXF7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATL1Q8WXF7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.32■□□□□ 0.52
ATL1Q8WXF7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATL1Q8WXF7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ATL1Q8WXF7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATL1Q8WXF7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ATL1Q8WXF7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.32■□□□□ 0.52
ATL1Q8WXF7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATL1Q8WXF7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATL1Q8WXF7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 AC068587.9-201ENST00000641814 219 ntBASIC18.31■□□□□ 0.52
ATL1Q8WXF7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATL1Q8WXF7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 TSPY7P-201ENST00000431358 1114 ntBASIC18.3■□□□□ 0.52
ATL1Q8WXF7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
ATL1Q8WXF7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ATL1Q8WXF7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATL1Q8WXF7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
ATL1Q8WXF7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.29■□□□□ 0.52
ATL1Q8WXF7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ATL1Q8WXF7 AC020763.4-201ENST00000623414 4170 ntBASIC18.29■□□□□ 0.52
ATL1Q8WXF7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATL1Q8WXF7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.29■□□□□ 0.52
ATL1Q8WXF7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATL1Q8WXF7 SNORA78-201ENST00000459373 127 ntBASIC18.29■□□□□ 0.52
ATL1Q8WXF7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATL1Q8WXF7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
ATL1Q8WXF7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATL1Q8WXF7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATL1Q8WXF7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATL1Q8WXF7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATL1Q8WXF7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATL1Q8WXF7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.29■□□□□ 0.52
ATL1Q8WXF7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATL1Q8WXF7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.28■□□□□ 0.52
ATL1Q8WXF7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATL1Q8WXF7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.28■□□□□ 0.52
ATL1Q8WXF7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATL1Q8WXF7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATL1Q8WXF7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms