Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HMGB4Q8WW32 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HMGB4Q8WW32 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.79■□□□□ 0.6
HMGB4Q8WW32 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.79■□□□□ 0.6
HMGB4Q8WW32 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.79■□□□□ 0.6
HMGB4Q8WW32 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGB4Q8WW32 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGB4Q8WW32 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HMGB4Q8WW32 TEX21P-204ENST00000641479 1693 ntBASIC18.79■□□□□ 0.6
HMGB4Q8WW32 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.79■□□□□ 0.6
HMGB4Q8WW32 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGB4Q8WW32 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.78■□□□□ 0.6
HMGB4Q8WW32 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.78■□□□□ 0.6
HMGB4Q8WW32 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGB4Q8WW32 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.78■□□□□ 0.6
HMGB4Q8WW32 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGB4Q8WW32 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HMGB4Q8WW32 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.78■□□□□ 0.6
HMGB4Q8WW32 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGB4Q8WW32 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.78■□□□□ 0.6
HMGB4Q8WW32 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMGB4Q8WW32 NUS1P1-201ENST00000446295 882 ntBASIC18.78■□□□□ 0.6
HMGB4Q8WW32 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HMGB4Q8WW32 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMGB4Q8WW32 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.78■□□□□ 0.6
HMGB4Q8WW32 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.78■□□□□ 0.6
HMGB4Q8WW32 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMGB4Q8WW32 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGB4Q8WW32 IFNL4P1-201ENST00000607083 540 ntBASIC18.78■□□□□ 0.6
HMGB4Q8WW32 AC010240.3-201ENST00000607688 395 ntBASIC18.78■□□□□ 0.6
HMGB4Q8WW32 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGB4Q8WW32 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.78■□□□□ 0.6
HMGB4Q8WW32 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.78■□□□□ 0.6
HMGB4Q8WW32 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
HMGB4Q8WW32 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HMGB4Q8WW32 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
HMGB4Q8WW32 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGB4Q8WW32 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.77■□□□□ 0.6
HMGB4Q8WW32 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.77■□□□□ 0.6
HMGB4Q8WW32 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGB4Q8WW32 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGB4Q8WW32 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HMGB4Q8WW32 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HMGB4Q8WW32 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HMGB4Q8WW32 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGB4Q8WW32 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HMGB4Q8WW32 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGB4Q8WW32 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGB4Q8WW32 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.77■□□□□ 0.6
HMGB4Q8WW32 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.77■□□□□ 0.6
HMGB4Q8WW32 FAAHP1-202ENST00000446499 1238 ntBASIC18.77■□□□□ 0.6
HMGB4Q8WW32 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HMGB4Q8WW32 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.77■□□□□ 0.6
HMGB4Q8WW32 AC104390.1-201ENST00000555663 520 ntBASIC18.77■□□□□ 0.6
HMGB4Q8WW32 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.77■□□□□ 0.6
HMGB4Q8WW32 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.77■□□□□ 0.6
HMGB4Q8WW32 AL732292.2-201ENST00000609649 430 ntBASIC18.77■□□□□ 0.6
HMGB4Q8WW32 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HMGB4Q8WW32 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.77■□□□□ 0.6
HMGB4Q8WW32 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGB4Q8WW32 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.77■□□□□ 0.6
HMGB4Q8WW32 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HMGB4Q8WW32 Z83836.1-201ENST00000624605 1642 ntBASIC18.77■□□□□ 0.6
HMGB4Q8WW32 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
HMGB4Q8WW32 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HMGB4Q8WW32 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HMGB4Q8WW32 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
HMGB4Q8WW32 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.76■□□□□ 0.59
HMGB4Q8WW32 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.76■□□□□ 0.59
HMGB4Q8WW32 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMGB4Q8WW32 KRT8P7-201ENST00000533003 1432 ntBASIC18.76■□□□□ 0.59
HMGB4Q8WW32 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.76■□□□□ 0.59
HMGB4Q8WW32 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGB4Q8WW32 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
HMGB4Q8WW32 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGB4Q8WW32 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HMGB4Q8WW32 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGB4Q8WW32 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.76■□□□□ 0.59
HMGB4Q8WW32 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGB4Q8WW32 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.76■□□□□ 0.59
HMGB4Q8WW32 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGB4Q8WW32 TPSP2-201ENST00000561760 610 ntBASIC18.76■□□□□ 0.59
HMGB4Q8WW32 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HMGB4Q8WW32 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.76■□□□□ 0.59
HMGB4Q8WW32 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMGB4Q8WW32 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGB4Q8WW32 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HMGB4Q8WW32 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMGB4Q8WW32 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGB4Q8WW32 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGB4Q8WW32 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGB4Q8WW32 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMGB4Q8WW32 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGB4Q8WW32 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.75■□□□□ 0.59
HMGB4Q8WW32 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGB4Q8WW32 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMGB4Q8WW32 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGB4Q8WW32 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGB4Q8WW32 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HMGB4Q8WW32 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms