Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
STAG1Q8WVM7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
STAG1Q8WVM7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC22.08■■□□□ 1.13
STAG1Q8WVM7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
STAG1Q8WVM7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
STAG1Q8WVM7 AP000523.1-201ENST00000398242 1049 ntBASIC22.08■■□□□ 1.13
STAG1Q8WVM7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
STAG1Q8WVM7 YBX1P2-201ENST00000489612 999 ntBASIC22.08■■□□□ 1.13
STAG1Q8WVM7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC22.08■■□□□ 1.13
STAG1Q8WVM7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC22.08■■□□□ 1.13
STAG1Q8WVM7 AL023973.1-201ENST00000624619 620 ntBASIC22.08■■□□□ 1.13
STAG1Q8WVM7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
STAG1Q8WVM7 AC034236.2-201ENST00000606662 1610 ntBASIC22.08■■□□□ 1.13
STAG1Q8WVM7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC22.08■■□□□ 1.12
STAG1Q8WVM7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
STAG1Q8WVM7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
STAG1Q8WVM7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
STAG1Q8WVM7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC22.08■■□□□ 1.12
STAG1Q8WVM7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
STAG1Q8WVM7 HOXB1-202ENST00000577092 1414 ntBASIC22.07■■□□□ 1.12
STAG1Q8WVM7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
STAG1Q8WVM7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
STAG1Q8WVM7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
STAG1Q8WVM7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
STAG1Q8WVM7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
STAG1Q8WVM7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
STAG1Q8WVM7 RNF152P1-201ENST00000397754 604 ntBASIC22.07■■□□□ 1.12
STAG1Q8WVM7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
STAG1Q8WVM7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
STAG1Q8WVM7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
STAG1Q8WVM7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
STAG1Q8WVM7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
STAG1Q8WVM7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
STAG1Q8WVM7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
STAG1Q8WVM7 AL031598.1-201ENST00000561511 1773 ntBASIC22.07■■□□□ 1.12
STAG1Q8WVM7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
STAG1Q8WVM7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
STAG1Q8WVM7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
STAG1Q8WVM7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC22.06■■□□□ 1.12
STAG1Q8WVM7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC22.06■■□□□ 1.12
STAG1Q8WVM7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.06■■□□□ 1.12
STAG1Q8WVM7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
STAG1Q8WVM7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC22.06■■□□□ 1.12
STAG1Q8WVM7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
STAG1Q8WVM7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC22.06■■□□□ 1.12
STAG1Q8WVM7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
STAG1Q8WVM7 TSPY5P-201ENST00000426936 936 ntBASIC22.06■■□□□ 1.12
STAG1Q8WVM7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC22.06■■□□□ 1.12
STAG1Q8WVM7 KRT18P41-201ENST00000518924 1277 ntBASIC22.06■■□□□ 1.12
STAG1Q8WVM7 AC022616.7-201ENST00000525383 220 ntBASIC22.06■■□□□ 1.12
STAG1Q8WVM7 AL441883.1-201ENST00000566170 1045 ntBASIC22.06■■□□□ 1.12
STAG1Q8WVM7 AC011558.1-201ENST00000623459 338 ntBASIC22.06■■□□□ 1.12
STAG1Q8WVM7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC22.06■■□□□ 1.12
STAG1Q8WVM7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC22.06■■□□□ 1.12
STAG1Q8WVM7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
STAG1Q8WVM7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
STAG1Q8WVM7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
STAG1Q8WVM7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
STAG1Q8WVM7 KRT8P7-201ENST00000533003 1432 ntBASIC22.06■■□□□ 1.12
STAG1Q8WVM7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
STAG1Q8WVM7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
STAG1Q8WVM7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
STAG1Q8WVM7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
STAG1Q8WVM7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
STAG1Q8WVM7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
STAG1Q8WVM7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
STAG1Q8WVM7 ANKRD20A18P-201ENST00000359341 492 ntBASIC22.05■■□□□ 1.12
STAG1Q8WVM7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC22.05■■□□□ 1.12
STAG1Q8WVM7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC22.05■■□□□ 1.12
STAG1Q8WVM7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
STAG1Q8WVM7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC22.05■■□□□ 1.12
STAG1Q8WVM7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC22.05■■□□□ 1.12
STAG1Q8WVM7 AL031432.5-201ENST00000641059 760 ntBASIC22.05■■□□□ 1.12
STAG1Q8WVM7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
STAG1Q8WVM7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
STAG1Q8WVM7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
STAG1Q8WVM7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC22.05■■□□□ 1.12
STAG1Q8WVM7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
STAG1Q8WVM7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
STAG1Q8WVM7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
STAG1Q8WVM7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
STAG1Q8WVM7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC22.04■■□□□ 1.12
STAG1Q8WVM7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.04■■□□□ 1.12
STAG1Q8WVM7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
STAG1Q8WVM7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
STAG1Q8WVM7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC22.04■■□□□ 1.12
STAG1Q8WVM7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC22.04■■□□□ 1.12
STAG1Q8WVM7 FAM8A6P-201ENST00000407496 1135 ntBASIC22.04■■□□□ 1.12
STAG1Q8WVM7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC22.04■■□□□ 1.12
STAG1Q8WVM7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC22.04■■□□□ 1.12
STAG1Q8WVM7 KRT18P23-201ENST00000435622 1283 ntBASIC22.04■■□□□ 1.12
STAG1Q8WVM7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC22.04■■□□□ 1.12
STAG1Q8WVM7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC22.04■■□□□ 1.12
STAG1Q8WVM7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC22.04■■□□□ 1.12
STAG1Q8WVM7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC22.04■■□□□ 1.12
STAG1Q8WVM7 AC112497.1-201ENST00000624824 639 ntBASIC22.04■■□□□ 1.12
STAG1Q8WVM7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC22.04■■□□□ 1.12
STAG1Q8WVM7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
STAG1Q8WVM7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
STAG1Q8WVM7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms