Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 AC079598.2-202ENST00000546624 1451 ntBASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 AP005242.2-201ENST00000580065 1175 ntBASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 AC126763.1-201ENST00000552015 2118 ntBASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 AC133561.5-201ENST00000635547 218 ntBASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH19Q8TAB3 AC008556.1-201ENST00000610908 2040 ntBASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 UNC93B2-201ENST00000285383 730 ntBASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 AL023284.2-201ENST00000405850 579 ntBASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 CA15P1-201ENST00000481698 905 ntBASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 GPAT2P1-201ENST00000444924 1672 ntBASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 AL109659.2-201ENST00000606809 1674 ntBASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH19Q8TAB3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH19Q8TAB3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDH19Q8TAB3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH19Q8TAB3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH19Q8TAB3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PCDH19Q8TAB3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDH19Q8TAB3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH19Q8TAB3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH19Q8TAB3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PCDH19Q8TAB3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH19Q8TAB3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH19Q8TAB3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDH19Q8TAB3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDH19Q8TAB3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
PCDH19Q8TAB3 AP000525.1-201ENST00000608286 694 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms