Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HIPK4Q8NE63 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
HIPK4Q8NE63 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIPK4Q8NE63 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.21■□□□□ 0.5
HIPK4Q8NE63 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.2■□□□□ 0.5
HIPK4Q8NE63 AC073210.2-201ENST00000430369 194 ntBASIC18.2■□□□□ 0.5
HIPK4Q8NE63 AF201337.1-201ENST00000520239 748 ntBASIC18.2■□□□□ 0.5
HIPK4Q8NE63 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HIPK4Q8NE63 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 AC105036.2-201ENST00000569468 176 ntBASIC18.19■□□□□ 0.5
HIPK4Q8NE63 AC080038.1-201ENST00000611274 1154 ntBASIC18.19■□□□□ 0.5
HIPK4Q8NE63 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 AC008764.6-201ENST00000595909 2069 ntBASIC18.19■□□□□ 0.5
HIPK4Q8NE63 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 AC126763.1-201ENST00000552015 2118 ntBASIC18.19■□□□□ 0.5
HIPK4Q8NE63 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIPK4Q8NE63 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 BX276092.2-201ENST00000417668 665 ntBASIC18.18■□□□□ 0.5
HIPK4Q8NE63 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 AC073111.5-205ENST00000641717 521 ntBASIC18.18■□□□□ 0.5
HIPK4Q8NE63 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HIPK4Q8NE63 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms