Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 KRT18P23-201ENST00000435622 1283 ntBASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 AL160237.2-201ENST00000556165 472 ntBASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 AC012615.1-201ENST00000565797 1299 ntBASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 AC104692.2-201ENST00000603054 253 ntBASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEFF1Q8IYR6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 AL022342.1-201ENST00000400363 863 ntBASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 KRT18P31-201ENST00000506277 1292 ntBASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEFF1Q8IYR6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TMEFF1Q8IYR6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 AC008556.1-201ENST00000610908 2040 ntBASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.59■□□□□ 0.57
TMEFF1Q8IYR6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms