Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 AL031985.4-201ENST00000642138 673 ntBASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 PRSS44-201ENST00000515154 1146 ntBASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 AC073195.1-201ENST00000607241 877 ntBASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 HEIH-201ENST00000623091 1652 ntBASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
LINC00346Q8IVM7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 PRORSD1P-201ENST00000295112 541 ntBASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 AC008040.2-201ENST00000461049 708 ntBASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 AC126763.1-201ENST00000552015 2118 ntBASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00346Q8IVM7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00346Q8IVM7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00346Q8IVM7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.59■□□□□ 0.25
LINC00346Q8IVM7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.59■□□□□ 0.25
LINC00346Q8IVM7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00346Q8IVM7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00346Q8IVM7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00346Q8IVM7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms