Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM50Q86XT4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM50Q86XT4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM50Q86XT4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM50Q86XT4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM50Q86XT4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM50Q86XT4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM50Q86XT4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.91■□□□□ 0.94
TRIM50Q86XT4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
TRIM50Q86XT4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TRIM50Q86XT4 HCG4P8-203ENST00000443049 980 ntBASIC20.91■□□□□ 0.94
TRIM50Q86XT4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM50Q86XT4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
TRIM50Q86XT4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM50Q86XT4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
TRIM50Q86XT4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM50Q86XT4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM50Q86XT4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.91■□□□□ 0.94
TRIM50Q86XT4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM50Q86XT4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM50Q86XT4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TRIM50Q86XT4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM50Q86XT4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM50Q86XT4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM50Q86XT4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM50Q86XT4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM50Q86XT4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM50Q86XT4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM50Q86XT4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM50Q86XT4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM50Q86XT4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM50Q86XT4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM50Q86XT4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM50Q86XT4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM50Q86XT4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM50Q86XT4 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.9■□□□□ 0.94
TRIM50Q86XT4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.9■□□□□ 0.94
TRIM50Q86XT4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.9■□□□□ 0.94
TRIM50Q86XT4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM50Q86XT4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
TRIM50Q86XT4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM50Q86XT4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM50Q86XT4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
TRIM50Q86XT4 FP475955.4-201ENST00000623131 1990 ntBASIC20.9■□□□□ 0.94
TRIM50Q86XT4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM50Q86XT4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM50Q86XT4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.89■□□□□ 0.94
TRIM50Q86XT4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM50Q86XT4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.89■□□□□ 0.94
TRIM50Q86XT4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM50Q86XT4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM50Q86XT4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
TRIM50Q86XT4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
TRIM50Q86XT4 KRT8P32-201ENST00000512863 1461 ntBASIC20.89■□□□□ 0.94
TRIM50Q86XT4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
TRIM50Q86XT4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM50Q86XT4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM50Q86XT4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM50Q86XT4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM50Q86XT4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM50Q86XT4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.89■□□□□ 0.93
TRIM50Q86XT4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.89■□□□□ 0.93
TRIM50Q86XT4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM50Q86XT4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM50Q86XT4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM50Q86XT4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM50Q86XT4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM50Q86XT4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM50Q86XT4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TRIM50Q86XT4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM50Q86XT4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM50Q86XT4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM50Q86XT4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
TRIM50Q86XT4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM50Q86XT4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM50Q86XT4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM50Q86XT4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM50Q86XT4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM50Q86XT4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM50Q86XT4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM50Q86XT4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.88■□□□□ 0.93
TRIM50Q86XT4 KRT18P23-201ENST00000435622 1283 ntBASIC20.88■□□□□ 0.93
TRIM50Q86XT4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM50Q86XT4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM50Q86XT4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
TRIM50Q86XT4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM50Q86XT4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM50Q86XT4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRIM50Q86XT4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM50Q86XT4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.88■□□□□ 0.93
TRIM50Q86XT4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms