Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 MIR3180-5-201ENST00000583743 153 ntBASIC15.8■□□□□ 0.12
CSMD2Q7Z408 AC124864.1-201ENST00000623408 392 ntBASIC15.8■□□□□ 0.12
CSMD2Q7Z408 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD2Q7Z408 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.79■□□□□ 0.12
CSMD2Q7Z408 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CSMD2Q7Z408 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.78■□□□□ 0.12
CSMD2Q7Z408 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.78■□□□□ 0.12
CSMD2Q7Z408 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.78■□□□□ 0.12
CSMD2Q7Z408 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSMD2Q7Z408 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSMD2Q7Z408 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSMD2Q7Z408 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSMD2Q7Z408 IGHGP-201ENST00000390555 1178 ntBASIC15.78■□□□□ 0.12
CSMD2Q7Z408 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CSMD2Q7Z408 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSMD2Q7Z408 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSMD2Q7Z408 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSMD2Q7Z408 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.78■□□□□ 0.12
CSMD2Q7Z408 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSMD2Q7Z408 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.78■□□□□ 0.12
CSMD2Q7Z408 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSMD2Q7Z408 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSMD2Q7Z408 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSMD2Q7Z408 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSMD2Q7Z408 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.78■□□□□ 0.12
CSMD2Q7Z408 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.78■□□□□ 0.12
CSMD2Q7Z408 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.78■□□□□ 0.12
CSMD2Q7Z408 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSMD2Q7Z408 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CSMD2Q7Z408 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSMD2Q7Z408 RPS8P6-201ENST00000426177 609 ntBASIC15.77■□□□□ 0.12
CSMD2Q7Z408 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.77■□□□□ 0.12
CSMD2Q7Z408 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CSMD2Q7Z408 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.77■□□□□ 0.12
CSMD2Q7Z408 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.77■□□□□ 0.12
CSMD2Q7Z408 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.77■□□□□ 0.12
CSMD2Q7Z408 AL157384.1-201ENST00000445995 2473 ntBASIC15.77■□□□□ 0.12
CSMD2Q7Z408 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSMD2Q7Z408 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC15.77■□□□□ 0.12
CSMD2Q7Z408 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC15.77■□□□□ 0.12
CSMD2Q7Z408 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CSMD2Q7Z408 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSMD2Q7Z408 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.77■□□□□ 0.12
CSMD2Q7Z408 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CSMD2Q7Z408 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSMD2Q7Z408 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSMD2Q7Z408 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.77■□□□□ 0.12
CSMD2Q7Z408 METTL21AP1-201ENST00000438852 635 ntBASIC15.77■□□□□ 0.12
CSMD2Q7Z408 MCCD1P1-208ENST00000445732 328 ntBASIC15.77■□□□□ 0.12
CSMD2Q7Z408 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CSMD2Q7Z408 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CSMD2Q7Z408 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
CSMD2Q7Z408 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CSMD2Q7Z408 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CSMD2Q7Z408 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CSMD2Q7Z408 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CSMD2Q7Z408 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.77■□□□□ 0.11
CSMD2Q7Z408 MINOS1P3-201ENST00000457048 203 ntBASIC15.77■□□□□ 0.11
CSMD2Q7Z408 SCARNA2-201ENST00000458748 420 ntBASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms