Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.35■□□□□ 0.37
NUP54Q7Z3B4 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.35■□□□□ 0.37
NUP54Q7Z3B4 AP003041.3-201ENST00000527151 707 ntBASIC17.35■□□□□ 0.37
NUP54Q7Z3B4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
NUP54Q7Z3B4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NUP54Q7Z3B4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP54Q7Z3B4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP54Q7Z3B4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NUP54Q7Z3B4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP54Q7Z3B4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
NUP54Q7Z3B4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NUP54Q7Z3B4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP54Q7Z3B4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP54Q7Z3B4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP54Q7Z3B4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUP54Q7Z3B4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NUP54Q7Z3B4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NUP54Q7Z3B4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
NUP54Q7Z3B4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
NUP54Q7Z3B4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP54Q7Z3B4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NUP54Q7Z3B4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NUP54Q7Z3B4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 INGX-201ENST00000359239 846 ntBASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 HMGA1P5-201ENST00000412453 271 ntBASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 AC005363.2-201ENST00000618631 242 ntBASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP54Q7Z3B4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.33■□□□□ 0.37
NUP54Q7Z3B4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NUP54Q7Z3B4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NUP54Q7Z3B4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
NUP54Q7Z3B4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NUP54Q7Z3B4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUP54Q7Z3B4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.33■□□□□ 0.36
NUP54Q7Z3B4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.33■□□□□ 0.36
NUP54Q7Z3B4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.33■□□□□ 0.36
NUP54Q7Z3B4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.33■□□□□ 0.36
NUP54Q7Z3B4 AL512604.3-201ENST00000569583 964 ntBASIC17.33■□□□□ 0.36
NUP54Q7Z3B4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.33■□□□□ 0.36
NUP54Q7Z3B4 AC008622.2-201ENST00000617006 1229 ntBASIC17.33■□□□□ 0.36
NUP54Q7Z3B4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NUP54Q7Z3B4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.33■□□□□ 0.36
NUP54Q7Z3B4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUP54Q7Z3B4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.33■□□□□ 0.36
NUP54Q7Z3B4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.33■□□□□ 0.36
NUP54Q7Z3B4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUP54Q7Z3B4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUP54Q7Z3B4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
NUP54Q7Z3B4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.33■□□□□ 0.36
NUP54Q7Z3B4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
NUP54Q7Z3B4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NUP54Q7Z3B4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 FAM87A-204ENST00000613235 858 ntBASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUP54Q7Z3B4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms