Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBA1AQ71U36 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 KRASP1-201ENST00000407852 552 ntBASIC17.29■□□□□ 0.36
TUBA1AQ71U36 AC239809.2-201ENST00000415381 517 ntBASIC17.29■□□□□ 0.36
TUBA1AQ71U36 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 AL512353.2-201ENST00000448759 1962 ntBASIC17.29■□□□□ 0.36
TUBA1AQ71U36 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBA1AQ71U36 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 RPPH1-201ENST00000516869 333 ntBASIC17.28■□□□□ 0.36
TUBA1AQ71U36 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 PRKY-204ENST00000533551 1019 ntBASIC17.28■□□□□ 0.36
TUBA1AQ71U36 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.28■□□□□ 0.36
TUBA1AQ71U36 AL359736.2-201ENST00000621992 437 ntBASIC17.28■□□□□ 0.36
TUBA1AQ71U36 FAM197Y4-202ENST00000622692 608 ntBASIC17.28■□□□□ 0.36
TUBA1AQ71U36 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 HTR7P1-202ENST00000624664 4411 ntBASIC17.28■□□□□ 0.36
TUBA1AQ71U36 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBA1AQ71U36 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TUBA1AQ71U36 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TUBA1AQ71U36 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TUBA1AQ71U36 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TUBA1AQ71U36 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.27■□□□□ 0.36
TUBA1AQ71U36 TEX21P-204ENST00000641479 1693 ntBASIC17.27■□□□□ 0.36
TUBA1AQ71U36 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
TUBA1AQ71U36 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TUBA1AQ71U36 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TUBA1AQ71U36 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TUBA1AQ71U36 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TUBA1AQ71U36 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TUBA1AQ71U36 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TUBA1AQ71U36 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.27■□□□□ 0.36
TUBA1AQ71U36 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.27■□□□□ 0.36
TUBA1AQ71U36 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.27■□□□□ 0.36
TUBA1AQ71U36 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.27■□□□□ 0.36
TUBA1AQ71U36 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
TUBA1AQ71U36 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TUBA1AQ71U36 AL121829.2-201ENST00000620908 328 ntBASIC17.27■□□□□ 0.36
TUBA1AQ71U36 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TUBA1AQ71U36 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
TUBA1AQ71U36 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TUBA1AQ71U36 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TUBA1AQ71U36 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TUBA1AQ71U36 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TUBA1AQ71U36 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TUBA1AQ71U36 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TUBA1AQ71U36 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TUBA1AQ71U36 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TUBA1AQ71U36 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TUBA1AQ71U36 AC116351.2-201ENST00000606540 1585 ntBASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms