Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 AC018470.1-201ENST00000624790 3129 ntBASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 KRT8P32-201ENST00000512863 1461 ntBASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
NHLRC1Q6VVB1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 AP003071.4-201ENST00000562276 1284 ntBASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 AC068587.9-201ENST00000641814 219 ntBASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 AL512353.2-201ENST00000448759 1962 ntBASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NHLRC1Q6VVB1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 MIR718-201ENST00000390190 70 ntBASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 TSPY7P-201ENST00000431358 1114 ntBASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 AL355355.2-201ENST00000442321 338 ntBASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NHLRC1Q6VVB1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
NHLRC1Q6VVB1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
NHLRC1Q6VVB1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
NHLRC1Q6VVB1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NHLRC1Q6VVB1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NHLRC1Q6VVB1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NHLRC1Q6VVB1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NHLRC1Q6VVB1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
NHLRC1Q6VVB1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.83■□□□□ 0.28
NHLRC1Q6VVB1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NHLRC1Q6VVB1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NHLRC1Q6VVB1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NHLRC1Q6VVB1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.83■□□□□ 0.28
NHLRC1Q6VVB1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.83■□□□□ 0.28
NHLRC1Q6VVB1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.83■□□□□ 0.28
NHLRC1Q6VVB1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.83■□□□□ 0.28
NHLRC1Q6VVB1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NHLRC1Q6VVB1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
NHLRC1Q6VVB1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.83■□□□□ 0.28
NHLRC1Q6VVB1 AC008622.2-201ENST00000617006 1229 ntBASIC16.83■□□□□ 0.28
NHLRC1Q6VVB1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NHLRC1Q6VVB1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NHLRC1Q6VVB1 AP006294.2-201ENST00000641667 209 ntBASIC16.83■□□□□ 0.28
NHLRC1Q6VVB1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
NHLRC1Q6VVB1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 Z98044.1-201ENST00000632503 1764 ntBASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NHLRC1Q6VVB1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms