Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 CD177P1-201ENST00000606252 935 ntBASIC16.89■□□□□ 0.29
LRFN4Q6PJG9 AC130371.2-201ENST00000619443 611 ntBASIC16.89■□□□□ 0.29
LRFN4Q6PJG9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.89■□□□□ 0.29
LRFN4Q6PJG9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.89■□□□□ 0.29
LRFN4Q6PJG9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRFN4Q6PJG9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
LRFN4Q6PJG9 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.89■□□□□ 0.29
LRFN4Q6PJG9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.89■□□□□ 0.29
LRFN4Q6PJG9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRFN4Q6PJG9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 AC008040.2-201ENST00000461049 708 ntBASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 AC011506.1-201ENST00000474329 610 ntBASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 AC026271.3-201ENST00000571884 352 ntBASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 AC233702.5-201ENST00000584107 538 ntBASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.88■□□□□ 0.29
LRFN4Q6PJG9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 AC004951.3-201ENST00000418645 1148 ntBASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 AC012618.2-201ENST00000428058 849 ntBASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 CROCCP3-202ENST00000420820 1947 ntBASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 KRT8P11-201ENST00000409686 1436 ntBASIC16.87■□□□□ 0.29
LRFN4Q6PJG9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN4Q6PJG9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN4Q6PJG9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN4Q6PJG9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.86■□□□□ 0.29
LRFN4Q6PJG9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN4Q6PJG9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN4Q6PJG9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN4Q6PJG9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LRFN4Q6PJG9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LRFN4Q6PJG9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN4Q6PJG9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN4Q6PJG9 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.86■□□□□ 0.29
LRFN4Q6PJG9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN4Q6PJG9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRFN4Q6PJG9 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
LRFN4Q6PJG9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LRFN4Q6PJG9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.86■□□□□ 0.29
LRFN4Q6PJG9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LRFN4Q6PJG9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.86■□□□□ 0.29
LRFN4Q6PJG9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.86■□□□□ 0.29
LRFN4Q6PJG9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms