Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CCDC62Q6P9F0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC62Q6P9F0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.08■□□□□ 0.97
CCDC62Q6P9F0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC62Q6P9F0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.08■□□□□ 0.97
CCDC62Q6P9F0 HOXB1-202ENST00000577092 1414 ntBASIC21.08■□□□□ 0.97
CCDC62Q6P9F0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC62Q6P9F0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC62Q6P9F0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC62Q6P9F0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC62Q6P9F0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC62Q6P9F0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC62Q6P9F0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 AL158211.5-201ENST00000623583 2518 ntBASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 KRT8P7-201ENST00000533003 1432 ntBASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 MIR564-202ENST00000385049 94 ntBASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 AL121894.2-201ENST00000602977 491 ntBASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 AC016734.2-201ENST00000624325 1377 ntBASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC62Q6P9F0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 AL162741.1-201ENST00000565563 1558 ntBASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 AL391807.1-203ENST00000604392 2365 ntBASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 MIR662-201ENST00000384847 95 ntBASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 AC104390.1-201ENST00000555663 520 ntBASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 AC141586.3-201ENST00000562166 1838 ntBASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC62Q6P9F0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 AL450487.1-201ENST00000426799 995 ntBASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 KRT18P23-201ENST00000435622 1283 ntBASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 AL136038.4-201ENST00000603606 1261 ntBASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 FP475955.4-201ENST00000623131 1990 ntBASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC62Q6P9F0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CCDC62Q6P9F0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms