Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 AC034232.1-201ENST00000506026 1064 ntBASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.88■□□□□ 0.93
SWSAP1Q6NVH7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 PCED1CP-201ENST00000419887 785 ntBASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 AC092597.1-201ENST00000487352 616 ntBASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 AC091076.1-201ENST00000610741 619 ntBASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 AC083849.1-201ENST00000615227 514 ntBASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SWSAP1Q6NVH7 HEIH-201ENST00000623091 1652 ntBASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 AC006333.2-201ENST00000607957 2099 ntBASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 ZNF444P1-201ENST00000559497 298 ntBASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 AC034236.2-201ENST00000606662 1610 ntBASIC20.86■□□□□ 0.93
SWSAP1Q6NVH7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SWSAP1Q6NVH7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.85■□□□□ 0.93
SWSAP1Q6NVH7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.85■□□□□ 0.93
SWSAP1Q6NVH7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SWSAP1Q6NVH7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SWSAP1Q6NVH7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.85■□□□□ 0.93
SWSAP1Q6NVH7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SWSAP1Q6NVH7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SWSAP1Q6NVH7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.85■□□□□ 0.93
SWSAP1Q6NVH7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.85■□□□□ 0.93
SWSAP1Q6NVH7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.85■□□□□ 0.93
SWSAP1Q6NVH7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SWSAP1Q6NVH7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.85■□□□□ 0.93
SWSAP1Q6NVH7 AL157888.1-201ENST00000631930 593 ntBASIC20.85■□□□□ 0.93
SWSAP1Q6NVH7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SWSAP1Q6NVH7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SWSAP1Q6NVH7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SWSAP1Q6NVH7 KRT8P7-201ENST00000533003 1432 ntBASIC20.85■□□□□ 0.93
SWSAP1Q6NVH7 HOXB1-202ENST00000577092 1414 ntBASIC20.85■□□□□ 0.93
SWSAP1Q6NVH7 AL357033.4-201ENST00000617703 1807 ntBASIC20.85■□□□□ 0.93
SWSAP1Q6NVH7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SWSAP1Q6NVH7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SWSAP1Q6NVH7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 AC005332.1-201ENST00000577698 1310 ntBASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms