Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.3■□□□□ 0.68
PTCRAQ6ISU1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCRAQ6ISU1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCRAQ6ISU1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTCRAQ6ISU1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.3■□□□□ 0.68
PTCRAQ6ISU1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 MIR3180-4-201ENST00000582223 153 ntBASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCRAQ6ISU1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 RBM17P3-201ENST00000417687 1192 ntBASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 KRT18P3-201ENST00000451602 1288 ntBASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.28■□□□□ 0.68
PTCRAQ6ISU1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 AC034105.1-201ENST00000563488 319 ntBASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 AC040169.1-201ENST00000565382 521 ntBASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTCRAQ6ISU1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTCRAQ6ISU1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
PTCRAQ6ISU1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.27■□□□□ 0.67
PTCRAQ6ISU1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.27■□□□□ 0.67
PTCRAQ6ISU1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTCRAQ6ISU1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTCRAQ6ISU1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTCRAQ6ISU1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PTCRAQ6ISU1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTCRAQ6ISU1 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTCRAQ6ISU1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.26■□□□□ 0.67
PTCRAQ6ISU1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms