Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 AC008556.1-201ENST00000610908 2040 ntBASIC21.29■■□□□ 1
PPP4R3AQ6IN85 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
PPP4R3AQ6IN85 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PPP4R3AQ6IN85 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PPP4R3AQ6IN85 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PPP4R3AQ6IN85 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.29■■□□□ 1
PPP4R3AQ6IN85 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.29■■□□□ 1
PPP4R3AQ6IN85 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.29■■□□□ 1
PPP4R3AQ6IN85 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.29■■□□□ 1
PPP4R3AQ6IN85 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PPP4R3AQ6IN85 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.29■■□□□ 1
PPP4R3AQ6IN85 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PPP4R3AQ6IN85 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.29■■□□□ 1
PPP4R3AQ6IN85 SLC25A3P1-201ENST00000443844 931 ntBASIC21.29■■□□□ 1
PPP4R3AQ6IN85 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PPP4R3AQ6IN85 WWOX-216ENST00000569818 525 ntBASIC21.29■■□□□ 1
PPP4R3AQ6IN85 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
PPP4R3AQ6IN85 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.29■■□□□ 1
PPP4R3AQ6IN85 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.29■■□□□ 1
PPP4R3AQ6IN85 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.29■■□□□ 1
PPP4R3AQ6IN85 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PPP4R3AQ6IN85 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.29■■□□□ 1
PPP4R3AQ6IN85 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PPP4R3AQ6IN85 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PPP4R3AQ6IN85 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PPP4R3AQ6IN85 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PPP4R3AQ6IN85 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PPP4R3AQ6IN85 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.28■■□□□ 1
PPP4R3AQ6IN85 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
PPP4R3AQ6IN85 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PPP4R3AQ6IN85 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PPP4R3AQ6IN85 CROCCP3-202ENST00000420820 1947 ntBASIC21.28■■□□□ 1
PPP4R3AQ6IN85 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PPP4R3AQ6IN85 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.28■■□□□ 1
PPP4R3AQ6IN85 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.28■■□□□ 1
PPP4R3AQ6IN85 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PPP4R3AQ6IN85 ECEL1P3-201ENST00000427961 737 ntBASIC21.28■■□□□ 1
PPP4R3AQ6IN85 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.28■■□□□ 1
PPP4R3AQ6IN85 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.28■■□□□ 1
PPP4R3AQ6IN85 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.28■■□□□ 1
PPP4R3AQ6IN85 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PPP4R3AQ6IN85 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PPP4R3AQ6IN85 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PPP4R3AQ6IN85 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.28■■□□□ 1
PPP4R3AQ6IN85 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.28■■□□□ 1
PPP4R3AQ6IN85 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PPP4R3AQ6IN85 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.28■■□□□ 1
PPP4R3AQ6IN85 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PPP4R3AQ6IN85 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.28■■□□□ 1
PPP4R3AQ6IN85 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.28■■□□□ 1
PPP4R3AQ6IN85 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.27■■□□□ 1
PPP4R3AQ6IN85 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.27■■□□□ 1
PPP4R3AQ6IN85 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PPP4R3AQ6IN85 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.27■■□□□ 1
PPP4R3AQ6IN85 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PPP4R3AQ6IN85 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PPP4R3AQ6IN85 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PPP4R3AQ6IN85 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PPP4R3AQ6IN85 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PPP4R3AQ6IN85 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.27■■□□□ 1
PPP4R3AQ6IN85 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.27■■□□□ 1
PPP4R3AQ6IN85 AL512604.3-201ENST00000569583 964 ntBASIC21.27■■□□□ 1
PPP4R3AQ6IN85 MIR3180-5-201ENST00000583743 153 ntBASIC21.27■■□□□ 1
PPP4R3AQ6IN85 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.27■■□□□ 1
PPP4R3AQ6IN85 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
PPP4R3AQ6IN85 CR769767.2-201ENST00000622735 460 ntBASIC21.27■■□□□ 1
PPP4R3AQ6IN85 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
PPP4R3AQ6IN85 KRT8P45-201ENST00000414328 1447 ntBASIC21.27■■□□□ 1
PPP4R3AQ6IN85 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PPP4R3AQ6IN85 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PPP4R3AQ6IN85 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
PPP4R3AQ6IN85 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PPP4R3AQ6IN85 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 MIR564-202ENST00000385049 94 ntBASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 AC113347.1-201ENST00000413321 391 ntBASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 AC005363.2-201ENST00000618631 242 ntBASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
PPP4R3AQ6IN85 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms