Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF43Q68DV7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF43Q68DV7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF43Q68DV7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF43Q68DV7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF43Q68DV7 SDHAP1-207ENST00000440850 2000 ntBASIC19.66■□□□□ 0.74
RNF43Q68DV7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RNF43Q68DV7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF43Q68DV7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RNF43Q68DV7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF43Q68DV7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF43Q68DV7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF43Q68DV7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF43Q68DV7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF43Q68DV7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF43Q68DV7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF43Q68DV7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF43Q68DV7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF43Q68DV7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF43Q68DV7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RNF43Q68DV7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF43Q68DV7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF43Q68DV7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF43Q68DV7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF43Q68DV7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF43Q68DV7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF43Q68DV7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF43Q68DV7 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.65■□□□□ 0.74
RNF43Q68DV7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF43Q68DV7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
RNF43Q68DV7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF43Q68DV7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.65■□□□□ 0.74
RNF43Q68DV7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF43Q68DV7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF43Q68DV7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RNF43Q68DV7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF43Q68DV7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF43Q68DV7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF43Q68DV7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF43Q68DV7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF43Q68DV7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF43Q68DV7 AC005332.8-201ENST00000622750 2735 ntBASIC19.65■□□□□ 0.74
RNF43Q68DV7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RNF43Q68DV7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF43Q68DV7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RNF43Q68DV7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF43Q68DV7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF43Q68DV7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RNF43Q68DV7 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.64■□□□□ 0.74
RNF43Q68DV7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RNF43Q68DV7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
RNF43Q68DV7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF43Q68DV7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RNF43Q68DV7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RNF43Q68DV7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF43Q68DV7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.64■□□□□ 0.73
RNF43Q68DV7 AK4P3-201ENST00000418260 669 ntBASIC19.64■□□□□ 0.73
RNF43Q68DV7 AC007663.1-201ENST00000438948 1240 ntBASIC19.64■□□□□ 0.73
RNF43Q68DV7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF43Q68DV7 ECEL1P2-202ENST00000465689 757 ntBASIC19.64■□□□□ 0.73
RNF43Q68DV7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.64■□□□□ 0.73
RNF43Q68DV7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.64■□□□□ 0.73
RNF43Q68DV7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF43Q68DV7 AC116562.4-202ENST00000641738 218 ntBASIC19.64■□□□□ 0.73
RNF43Q68DV7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF43Q68DV7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF43Q68DV7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF43Q68DV7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF43Q68DV7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF43Q68DV7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF43Q68DV7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF43Q68DV7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF43Q68DV7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RNF43Q68DV7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF43Q68DV7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF43Q68DV7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF43Q68DV7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF43Q68DV7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF43Q68DV7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RNF43Q68DV7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.63■□□□□ 0.73
RNF43Q68DV7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF43Q68DV7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF43Q68DV7 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.63■□□□□ 0.73
RNF43Q68DV7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF43Q68DV7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RNF43Q68DV7 TSPY21P-201ENST00000433481 731 ntBASIC19.63■□□□□ 0.73
RNF43Q68DV7 TSPY23P-201ENST00000440136 739 ntBASIC19.63■□□□□ 0.73
RNF43Q68DV7 CCR12P-201ENST00000446203 998 ntBASIC19.63■□□□□ 0.73
RNF43Q68DV7 AC128688.1-201ENST00000487626 519 ntBASIC19.63■□□□□ 0.73
RNF43Q68DV7 KRT18P56-201ENST00000507275 550 ntBASIC19.63■□□□□ 0.73
RNF43Q68DV7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF43Q68DV7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF43Q68DV7 AL353719.1-201ENST00000566847 864 ntBASIC19.63■□□□□ 0.73
RNF43Q68DV7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF43Q68DV7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF43Q68DV7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF43Q68DV7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF43Q68DV7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RNF43Q68DV7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF43Q68DV7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms