Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TTC39BQ5VTQ0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
TTC39BQ5VTQ0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.53■□□□□ 0.72
TTC39BQ5VTQ0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.53■□□□□ 0.72
TTC39BQ5VTQ0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.53■□□□□ 0.72
TTC39BQ5VTQ0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TTC39BQ5VTQ0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TTC39BQ5VTQ0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TTC39BQ5VTQ0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
TTC39BQ5VTQ0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TTC39BQ5VTQ0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
TTC39BQ5VTQ0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TTC39BQ5VTQ0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TTC39BQ5VTQ0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TTC39BQ5VTQ0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TTC39BQ5VTQ0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TTC39BQ5VTQ0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TTC39BQ5VTQ0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.52■□□□□ 0.72
TTC39BQ5VTQ0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TTC39BQ5VTQ0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TTC39BQ5VTQ0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TTC39BQ5VTQ0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.52■□□□□ 0.72
TTC39BQ5VTQ0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TTC39BQ5VTQ0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
TTC39BQ5VTQ0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
TTC39BQ5VTQ0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TTC39BQ5VTQ0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TTC39BQ5VTQ0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.52■□□□□ 0.72
TTC39BQ5VTQ0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TTC39BQ5VTQ0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TTC39BQ5VTQ0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
TTC39BQ5VTQ0 AL049812.1-201ENST00000432563 2267 ntBASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 FAM210CP-201ENST00000445714 574 ntBASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 AC006333.2-201ENST00000607957 2099 ntBASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 FEM1AP3-201ENST00000403722 1741 ntBASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 KRT8P3-201ENST00000519669 1449 ntBASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TTC39BQ5VTQ0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 TERF1P1-201ENST00000311003 1181 ntBASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 INGX-201ENST00000359239 846 ntBASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 LIN28AP1-201ENST00000429574 405 ntBASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 AL137013.1-201ENST00000432946 1228 ntBASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 AP003041.3-201ENST00000527151 707 ntBASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 AC092865.7-201ENST00000641832 219 ntBASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 FP475955.4-201ENST00000623131 1990 ntBASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39BQ5VTQ0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39BQ5VTQ0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms