Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC004835.2-201ENST00000603762 682 ntBASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 AC116407.2-201ENST00000613639 860 ntBASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 AL358472.5-202ENST00000641448 1267 ntBASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL13A1Q5TAT6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.03■□□□□ 0.96
COL13A1Q5TAT6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL13A1Q5TAT6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.03■□□□□ 0.96
COL13A1Q5TAT6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
COL13A1Q5TAT6 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC21.03■□□□□ 0.96
COL13A1Q5TAT6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
COL13A1Q5TAT6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
COL13A1Q5TAT6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC21.03■□□□□ 0.96
COL13A1Q5TAT6 AC104390.1-201ENST00000555663 520 ntBASIC21.03■□□□□ 0.96
COL13A1Q5TAT6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC21.03■□□□□ 0.96
COL13A1Q5TAT6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.03■□□□□ 0.96
COL13A1Q5TAT6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
COL13A1Q5TAT6 AC008761.3-201ENST00000624803 892 ntBASIC21.03■□□□□ 0.96
COL13A1Q5TAT6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.03■□□□□ 0.96
COL13A1Q5TAT6 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.03■□□□□ 0.96
COL13A1Q5TAT6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL13A1Q5TAT6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL13A1Q5TAT6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
COL13A1Q5TAT6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.03■□□□□ 0.96
COL13A1Q5TAT6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL13A1Q5TAT6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL13A1Q5TAT6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL13A1Q5TAT6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.02■□□□□ 0.96
COL13A1Q5TAT6 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL13A1Q5TAT6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL13A1Q5TAT6 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL13A1Q5TAT6 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC21.02■□□□□ 0.96
COL13A1Q5TAT6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC21.02■□□□□ 0.96
COL13A1Q5TAT6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL13A1Q5TAT6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL13A1Q5TAT6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.02■□□□□ 0.96
COL13A1Q5TAT6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC21.02■□□□□ 0.96
COL13A1Q5TAT6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL13A1Q5TAT6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL13A1Q5TAT6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL13A1Q5TAT6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL13A1Q5TAT6 INTS4P1-201ENST00000438455 1935 ntBASIC21.02■□□□□ 0.95
COL13A1Q5TAT6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL13A1Q5TAT6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL13A1Q5TAT6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
COL13A1Q5TAT6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL13A1Q5TAT6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.01■□□□□ 0.95
COL13A1Q5TAT6 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL13A1Q5TAT6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.01■□□□□ 0.95
COL13A1Q5TAT6 ABCD1P5-201ENST00000445663 754 ntBASIC21.01■□□□□ 0.95
COL13A1Q5TAT6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.01■□□□□ 0.95
COL13A1Q5TAT6 IGHV3-71-201ENST00000523324 359 ntBASIC21.01■□□□□ 0.95
COL13A1Q5TAT6 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC21.01■□□□□ 0.95
COL13A1Q5TAT6 IFT20-216ENST00000588477 774 ntTSL 5 BASIC21.01■□□□□ 0.95
COL13A1Q5TAT6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL13A1Q5TAT6 RETN-203ENST00000629642 400 ntTSL 5 BASIC21.01■□□□□ 0.95
COL13A1Q5TAT6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.01■□□□□ 0.95
COL13A1Q5TAT6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL13A1Q5TAT6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.01■□□□□ 0.95
COL13A1Q5TAT6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
COL13A1Q5TAT6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL13A1Q5TAT6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
COL13A1Q5TAT6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL13A1Q5TAT6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL13A1Q5TAT6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21■□□□□ 0.95
COL13A1Q5TAT6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL13A1Q5TAT6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COL13A1Q5TAT6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL13A1Q5TAT6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC21■□□□□ 0.95
COL13A1Q5TAT6 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC21■□□□□ 0.95
COL13A1Q5TAT6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC21■□□□□ 0.95
COL13A1Q5TAT6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC21■□□□□ 0.95
COL13A1Q5TAT6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL13A1Q5TAT6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC21■□□□□ 0.95
COL13A1Q5TAT6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
COL13A1Q5TAT6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC21■□□□□ 0.95
COL13A1Q5TAT6 LINC00628-201ENST00000628516 1289 ntBASIC21■□□□□ 0.95
COL13A1Q5TAT6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC21■□□□□ 0.95
COL13A1Q5TAT6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL13A1Q5TAT6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
COL13A1Q5TAT6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL13A1Q5TAT6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL13A1Q5TAT6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL13A1Q5TAT6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
COL13A1Q5TAT6 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL13A1Q5TAT6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.99■□□□□ 0.95
COL13A1Q5TAT6 BASP1P1-201ENST00000430708 665 ntBASIC20.99■□□□□ 0.95
COL13A1Q5TAT6 NKAPP1-205ENST00000585790 367 ntBASIC20.99■□□□□ 0.95
COL13A1Q5TAT6 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC20.99■□□□□ 0.95
COL13A1Q5TAT6 AL132655.2-201ENST00000596276 594 ntBASIC20.99■□□□□ 0.95
COL13A1Q5TAT6 AC005593.1-201ENST00000624894 515 ntBASIC20.99■□□□□ 0.95
COL13A1Q5TAT6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL13A1Q5TAT6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms