Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
VARS2Q5ST30 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VARS2Q5ST30 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.85■□□□□ 0.77
VARS2Q5ST30 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VARS2Q5ST30 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
VARS2Q5ST30 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
VARS2Q5ST30 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.85■□□□□ 0.77
VARS2Q5ST30 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VARS2Q5ST30 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VARS2Q5ST30 HLA-F-220ENST00000434407 884 ntBASIC19.85■□□□□ 0.77
VARS2Q5ST30 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.85■□□□□ 0.77
VARS2Q5ST30 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.85■□□□□ 0.77
VARS2Q5ST30 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.85■□□□□ 0.77
VARS2Q5ST30 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
VARS2Q5ST30 AL136038.4-201ENST00000603606 1261 ntBASIC19.85■□□□□ 0.77
VARS2Q5ST30 AC010240.3-201ENST00000607688 395 ntBASIC19.85■□□□□ 0.77
VARS2Q5ST30 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.85■□□□□ 0.77
VARS2Q5ST30 AC068587.9-201ENST00000641814 219 ntBASIC19.85■□□□□ 0.77
VARS2Q5ST30 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
VARS2Q5ST30 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
VARS2Q5ST30 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
VARS2Q5ST30 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VARS2Q5ST30 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VARS2Q5ST30 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VARS2Q5ST30 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.85■□□□□ 0.77
VARS2Q5ST30 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.85■□□□□ 0.77
VARS2Q5ST30 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VARS2Q5ST30 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
VARS2Q5ST30 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VARS2Q5ST30 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VARS2Q5ST30 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
VARS2Q5ST30 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.84■□□□□ 0.77
VARS2Q5ST30 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
VARS2Q5ST30 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VARS2Q5ST30 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VARS2Q5ST30 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
VARS2Q5ST30 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.84■□□□□ 0.77
VARS2Q5ST30 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
VARS2Q5ST30 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VARS2Q5ST30 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VARS2Q5ST30 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VARS2Q5ST30 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VARS2Q5ST30 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
VARS2Q5ST30 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.84■□□□□ 0.77
VARS2Q5ST30 AL391807.1-203ENST00000604392 2365 ntBASIC19.84■□□□□ 0.77
VARS2Q5ST30 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
VARS2Q5ST30 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
VARS2Q5ST30 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.84■□□□□ 0.77
VARS2Q5ST30 AC034236.2-201ENST00000606662 1610 ntBASIC19.84■□□□□ 0.77
VARS2Q5ST30 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VARS2Q5ST30 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.83■□□□□ 0.77
VARS2Q5ST30 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
VARS2Q5ST30 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.83■□□□□ 0.77
VARS2Q5ST30 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VARS2Q5ST30 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VARS2Q5ST30 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
VARS2Q5ST30 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VARS2Q5ST30 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VARS2Q5ST30 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.83■□□□□ 0.77
VARS2Q5ST30 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.83■□□□□ 0.77
VARS2Q5ST30 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.83■□□□□ 0.77
VARS2Q5ST30 AC011498.5-201ENST00000592027 486 ntBASIC19.83■□□□□ 0.77
VARS2Q5ST30 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.83■□□□□ 0.77
VARS2Q5ST30 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.83■□□□□ 0.77
VARS2Q5ST30 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.83■□□□□ 0.77
VARS2Q5ST30 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
VARS2Q5ST30 AC006333.2-201ENST00000607957 2099 ntBASIC19.83■□□□□ 0.76
VARS2Q5ST30 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
VARS2Q5ST30 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VARS2Q5ST30 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.83■□□□□ 0.76
VARS2Q5ST30 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.82■□□□□ 0.76
VARS2Q5ST30 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.82■□□□□ 0.76
VARS2Q5ST30 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.82■□□□□ 0.76
VARS2Q5ST30 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VARS2Q5ST30 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.82■□□□□ 0.76
VARS2Q5ST30 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VARS2Q5ST30 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VARS2Q5ST30 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VARS2Q5ST30 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
VARS2Q5ST30 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.82■□□□□ 0.76
VARS2Q5ST30 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
VARS2Q5ST30 ATP5G2P1-201ENST00000433580 426 ntBASIC19.82■□□□□ 0.76
VARS2Q5ST30 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
VARS2Q5ST30 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.82■□□□□ 0.76
VARS2Q5ST30 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VARS2Q5ST30 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.82■□□□□ 0.76
VARS2Q5ST30 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
VARS2Q5ST30 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.82■□□□□ 0.76
VARS2Q5ST30 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.82■□□□□ 0.76
VARS2Q5ST30 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VARS2Q5ST30 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VARS2Q5ST30 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.82■□□□□ 0.76
VARS2Q5ST30 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.82■□□□□ 0.76
VARS2Q5ST30 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.82■□□□□ 0.76
VARS2Q5ST30 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.82■□□□□ 0.76
VARS2Q5ST30 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VARS2Q5ST30 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.81■□□□□ 0.76
VARS2Q5ST30 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.81■□□□□ 0.76
VARS2Q5ST30 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VARS2Q5ST30 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms