Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSL3PQ5NE16 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CTSL3PQ5NE16 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
CTSL3PQ5NE16 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.48■□□□□ 0.55
CTSL3PQ5NE16 MCCD1P1-208ENST00000445732 328 ntBASIC18.48■□□□□ 0.55
CTSL3PQ5NE16 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.48■□□□□ 0.55
CTSL3PQ5NE16 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.48■□□□□ 0.55
CTSL3PQ5NE16 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.48■□□□□ 0.55
CTSL3PQ5NE16 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
CTSL3PQ5NE16 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTSL3PQ5NE16 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSL3PQ5NE16 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CTSL3PQ5NE16 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSL3PQ5NE16 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.48■□□□□ 0.55
CTSL3PQ5NE16 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSL3PQ5NE16 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSL3PQ5NE16 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
CTSL3PQ5NE16 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSL3PQ5NE16 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CTSL3PQ5NE16 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSL3PQ5NE16 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CTSL3PQ5NE16 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSL3PQ5NE16 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.48■□□□□ 0.55
CTSL3PQ5NE16 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 AC090164.3-201ENST00000610780 2143 ntBASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 SLC25A1P2-201ENST00000430693 912 ntBASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 AP003041.3-201ENST00000527151 707 ntBASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 AC092338.2-201ENST00000568827 1415 ntBASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.47■□□□□ 0.55
CTSL3PQ5NE16 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 CYP2D8P-201ENST00000433633 1490 ntBASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 AL353719.1-201ENST00000566847 864 ntBASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 KRT8P45-201ENST00000414328 1447 ntBASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CTSL3PQ5NE16 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CTSL3PQ5NE16 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.45■□□□□ 0.54
CTSL3PQ5NE16 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CTSL3PQ5NE16 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.45■□□□□ 0.54
CTSL3PQ5NE16 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.45■□□□□ 0.54
CTSL3PQ5NE16 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTSL3PQ5NE16 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTSL3PQ5NE16 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTSL3PQ5NE16 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTSL3PQ5NE16 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.45■□□□□ 0.54
CTSL3PQ5NE16 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTSL3PQ5NE16 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CTSL3PQ5NE16 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CTSL3PQ5NE16 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms