Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PDS5AQ29RF7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PDS5AQ29RF7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
PDS5AQ29RF7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PDS5AQ29RF7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
PDS5AQ29RF7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDS5AQ29RF7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC22.46■■□□□ 1.19
PDS5AQ29RF7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDS5AQ29RF7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDS5AQ29RF7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDS5AQ29RF7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PDS5AQ29RF7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PDS5AQ29RF7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC22.46■■□□□ 1.19
PDS5AQ29RF7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDS5AQ29RF7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDS5AQ29RF7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
PDS5AQ29RF7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PDS5AQ29RF7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PDS5AQ29RF7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PDS5AQ29RF7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC22.46■■□□□ 1.19
PDS5AQ29RF7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.46■■□□□ 1.19
PDS5AQ29RF7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDS5AQ29RF7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDS5AQ29RF7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
PDS5AQ29RF7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.19
PDS5AQ29RF7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDS5AQ29RF7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDS5AQ29RF7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.45■■□□□ 1.18
PDS5AQ29RF7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDS5AQ29RF7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
PDS5AQ29RF7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PDS5AQ29RF7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC22.45■■□□□ 1.18
PDS5AQ29RF7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC22.45■■□□□ 1.18
PDS5AQ29RF7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC22.45■■□□□ 1.18
PDS5AQ29RF7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC22.45■■□□□ 1.18
PDS5AQ29RF7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC22.45■■□□□ 1.18
PDS5AQ29RF7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC22.45■■□□□ 1.18
PDS5AQ29RF7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
PDS5AQ29RF7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC22.45■■□□□ 1.18
PDS5AQ29RF7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
PDS5AQ29RF7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
PDS5AQ29RF7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PDS5AQ29RF7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC22.45■■□□□ 1.18
PDS5AQ29RF7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDS5AQ29RF7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDS5AQ29RF7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PDS5AQ29RF7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDS5AQ29RF7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.44■■□□□ 1.18
PDS5AQ29RF7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.44■■□□□ 1.18
PDS5AQ29RF7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC22.44■■□□□ 1.18
PDS5AQ29RF7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDS5AQ29RF7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
PDS5AQ29RF7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDS5AQ29RF7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDS5AQ29RF7 HCG4P8-203ENST00000443049 980 ntBASIC22.44■■□□□ 1.18
PDS5AQ29RF7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
PDS5AQ29RF7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC22.44■■□□□ 1.18
PDS5AQ29RF7 KRT18P56-201ENST00000507275 550 ntBASIC22.44■■□□□ 1.18
PDS5AQ29RF7 KRT8P26-201ENST00000534154 1276 ntBASIC22.44■■□□□ 1.18
PDS5AQ29RF7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC22.44■■□□□ 1.18
PDS5AQ29RF7 AL121672.3-201ENST00000608644 468 ntBASIC22.44■■□□□ 1.18
PDS5AQ29RF7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
PDS5AQ29RF7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PDS5AQ29RF7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 AC016734.2-201ENST00000624325 1377 ntBASIC22.43■■□□□ 1.18
PDS5AQ29RF7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDS5AQ29RF7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms