Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SEC61BP60468 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SEC61BP60468 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC10.07□□□□□ -0.8
SEC61BP60468 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
SEC61BP60468 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC10.07□□□□□ -0.8
SEC61BP60468 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SEC61BP60468 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SEC61BP60468 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SEC61BP60468 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC10.07□□□□□ -0.8
SEC61BP60468 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SEC61BP60468 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SEC61BP60468 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
SEC61BP60468 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SEC61BP60468 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
SEC61BP60468 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SEC61BP60468 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC10.07□□□□□ -0.8
SEC61BP60468 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
SEC61BP60468 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC10.06□□□□□ -0.8
SEC61BP60468 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SEC61BP60468 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC10.06□□□□□ -0.8
SEC61BP60468 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC10.06□□□□□ -0.8
SEC61BP60468 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC10.06□□□□□ -0.8
SEC61BP60468 DUSP5P1-201ENST00000441325 1139 ntBASIC10.06□□□□□ -0.8
SEC61BP60468 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 AC111152.3-201ENST00000569699 673 ntBASIC10.06□□□□□ -0.8
SEC61BP60468 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC10.06□□□□□ -0.8
SEC61BP60468 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
SEC61BP60468 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC10.06□□□□□ -0.8
SEC61BP60468 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC10.06□□□□□ -0.8
SEC61BP60468 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC10.06□□□□□ -0.8
SEC61BP60468 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 RNF165-205ENST00000588679 2904 ntBASIC10.06□□□□□ -0.8
SEC61BP60468 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SEC61BP60468 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC10.06□□□□□ -0.8
SEC61BP60468 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
SEC61BP60468 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
SEC61BP60468 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SEC61BP60468 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
SEC61BP60468 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SEC61BP60468 AC099778.1-201ENST00000568593 1911 ntBASIC10.05□□□□□ -0.8
SEC61BP60468 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SEC61BP60468 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SEC61BP60468 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SEC61BP60468 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC10.05□□□□□ -0.8
SEC61BP60468 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SEC61BP60468 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
SEC61BP60468 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC10.05□□□□□ -0.8
SEC61BP60468 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SEC61BP60468 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SEC61BP60468 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
SEC61BP60468 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SEC61BP60468 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SEC61BP60468 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SEC61BP60468 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SEC61BP60468 Z82202.1-201ENST00000623446 1880 ntBASIC10.05□□□□□ -0.8
SEC61BP60468 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC10.05□□□□□ -0.8
SEC61BP60468 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SEC61BP60468 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SEC61BP60468 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SEC61BP60468 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC10.05□□□□□ -0.8
SEC61BP60468 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC10.05□□□□□ -0.8
SEC61BP60468 AC026396.1-201ENST00000419388 421 ntBASIC10.05□□□□□ -0.8
SEC61BP60468 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SEC61BP60468 KRT8P26-201ENST00000534154 1276 ntBASIC10.05□□□□□ -0.8
SEC61BP60468 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC10.05□□□□□ -0.8
SEC61BP60468 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC10.05□□□□□ -0.8
SEC61BP60468 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC10.05□□□□□ -0.8
SEC61BP60468 AL136038.4-201ENST00000603606 1261 ntBASIC10.05□□□□□ -0.8
SEC61BP60468 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC10.05□□□□□ -0.8
SEC61BP60468 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC10.05□□□□□ -0.8
SEC61BP60468 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SEC61BP60468 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
SEC61BP60468 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SEC61BP60468 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC10.05□□□□□ -0.8
SEC61BP60468 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SEC61BP60468 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SEC61BP60468 AL391422.3-201ENST00000603791 2761 ntBASIC10.05□□□□□ -0.8
SEC61BP60468 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms