Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
NR1H2P55055 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H2P55055 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H2P55055 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H2P55055 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.76■□□□□ 0.43
NR1H2P55055 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H2P55055 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NR1H2P55055 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H2P55055 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H2P55055 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H2P55055 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.76■□□□□ 0.43
NR1H2P55055 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.76■□□□□ 0.43
NR1H2P55055 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.76■□□□□ 0.43
NR1H2P55055 AC073648.6-201ENST00000641589 218 ntBASIC17.76■□□□□ 0.43
NR1H2P55055 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H2P55055 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NR1H2P55055 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H2P55055 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.76■□□□□ 0.43
NR1H2P55055 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NR1H2P55055 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H2P55055 AC084018.2-201ENST00000613093 2607 ntBASIC17.76■□□□□ 0.43
NR1H2P55055 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.76■□□□□ 0.43
NR1H2P55055 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H2P55055 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H2P55055 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.76■□□□□ 0.43
NR1H2P55055 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H2P55055 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H2P55055 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.75■□□□□ 0.43
NR1H2P55055 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H2P55055 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H2P55055 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H2P55055 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
NR1H2P55055 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H2P55055 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H2P55055 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H2P55055 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H2P55055 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H2P55055 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
NR1H2P55055 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H2P55055 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H2P55055 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.75■□□□□ 0.43
NR1H2P55055 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.75■□□□□ 0.43
NR1H2P55055 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H2P55055 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H2P55055 KRT17P3-201ENST00000420566 1262 ntBASIC17.75■□□□□ 0.43
NR1H2P55055 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.75■□□□□ 0.43
NR1H2P55055 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H2P55055 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.75■□□□□ 0.43
NR1H2P55055 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.75■□□□□ 0.43
NR1H2P55055 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.75■□□□□ 0.43
NR1H2P55055 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H2P55055 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H2P55055 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.75■□□□□ 0.43
NR1H2P55055 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H2P55055 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H2P55055 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H2P55055 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H2P55055 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.75■□□□□ 0.43
NR1H2P55055 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NR1H2P55055 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H2P55055 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NR1H2P55055 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.75■□□□□ 0.43
NR1H2P55055 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.74■□□□□ 0.43
NR1H2P55055 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H2P55055 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H2P55055 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H2P55055 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.74■□□□□ 0.43
NR1H2P55055 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H2P55055 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
NR1H2P55055 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H2P55055 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.74■□□□□ 0.43
NR1H2P55055 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.74■□□□□ 0.43
NR1H2P55055 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.74■□□□□ 0.43
NR1H2P55055 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.74■□□□□ 0.43
NR1H2P55055 UNC93B4-201ENST00000505679 747 ntBASIC17.74■□□□□ 0.43
NR1H2P55055 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.74■□□□□ 0.43
NR1H2P55055 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.74■□□□□ 0.43
NR1H2P55055 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.74■□□□□ 0.43
NR1H2P55055 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
NR1H2P55055 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.74■□□□□ 0.43
NR1H2P55055 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H2P55055 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H2P55055 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H2P55055 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
NR1H2P55055 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H2P55055 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.74■□□□□ 0.43
NR1H2P55055 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.74■□□□□ 0.43
NR1H2P55055 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H2P55055 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H2P55055 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.74■□□□□ 0.43
NR1H2P55055 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H2P55055 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.73■□□□□ 0.43
NR1H2P55055 GNAS-203ENST00000306120 1878 ntBASIC17.73■□□□□ 0.43
NR1H2P55055 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H2P55055 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.73■□□□□ 0.43
NR1H2P55055 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.73■□□□□ 0.43
NR1H2P55055 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H2P55055 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H2P55055 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.73■□□□□ 0.43
NR1H2P55055 AC087633.2-202ENST00000565166 1439 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms