Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATN1P54259 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATN1P54259 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.64■□□□□ 0.9
ATN1P54259 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.64■□□□□ 0.9
ATN1P54259 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATN1P54259 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
ATN1P54259 KRT8P7-201ENST00000533003 1432 ntBASIC20.64■□□□□ 0.89
ATN1P54259 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATN1P54259 AC243591.1-201ENST00000452967 1364 ntBASIC20.64■□□□□ 0.89
ATN1P54259 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATN1P54259 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ATN1P54259 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.64■□□□□ 0.89
ATN1P54259 BX842568.4-201ENST00000421222 227 ntBASIC20.64■□□□□ 0.89
ATN1P54259 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATN1P54259 AF186996.4-201ENST00000467186 377 ntBASIC20.64■□□□□ 0.89
ATN1P54259 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.64■□□□□ 0.89
ATN1P54259 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATN1P54259 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATN1P54259 AL109659.2-201ENST00000606809 1674 ntBASIC20.64■□□□□ 0.89
ATN1P54259 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ATN1P54259 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ATN1P54259 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATN1P54259 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ATN1P54259 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATN1P54259 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
ATN1P54259 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATN1P54259 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ATN1P54259 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.63■□□□□ 0.89
ATN1P54259 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC20.63■□□□□ 0.89
ATN1P54259 AC093909.1-201ENST00000504731 1122 ntBASIC20.63■□□□□ 0.89
ATN1P54259 RNPS1P1-201ENST00000507437 918 ntBASIC20.63■□□□□ 0.89
ATN1P54259 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.63■□□□□ 0.89
ATN1P54259 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.63■□□□□ 0.89
ATN1P54259 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.63■□□□□ 0.89
ATN1P54259 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATN1P54259 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATN1P54259 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ATN1P54259 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATN1P54259 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATN1P54259 HOXB1-202ENST00000577092 1414 ntBASIC20.62■□□□□ 0.89
ATN1P54259 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.62■□□□□ 0.89
ATN1P54259 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATN1P54259 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ATN1P54259 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATN1P54259 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
ATN1P54259 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.62■□□□□ 0.89
ATN1P54259 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.62■□□□□ 0.89
ATN1P54259 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.62■□□□□ 0.89
ATN1P54259 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.62■□□□□ 0.89
ATN1P54259 AC073648.2-201ENST00000510116 352 ntBASIC20.62■□□□□ 0.89
ATN1P54259 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATN1P54259 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.62■□□□□ 0.89
ATN1P54259 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATN1P54259 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATN1P54259 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATN1P54259 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATN1P54259 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATN1P54259 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATN1P54259 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATN1P54259 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATN1P54259 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.61■□□□□ 0.89
ATN1P54259 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATN1P54259 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.61■□□□□ 0.89
ATN1P54259 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.61■□□□□ 0.89
ATN1P54259 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATN1P54259 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ATN1P54259 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.61■□□□□ 0.89
ATN1P54259 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.61■□□□□ 0.89
ATN1P54259 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.61■□□□□ 0.89
ATN1P54259 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.61■□□□□ 0.89
ATN1P54259 AL049840.3-201ENST00000602669 611 ntBASIC20.61■□□□□ 0.89
ATN1P54259 AL591684.3-201ENST00000605187 298 ntBASIC20.61■□□□□ 0.89
ATN1P54259 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
ATN1P54259 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ATN1P54259 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATN1P54259 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATN1P54259 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ATN1P54259 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.6■□□□□ 0.89
ATN1P54259 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATN1P54259 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATN1P54259 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.6■□□□□ 0.89
ATN1P54259 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATN1P54259 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATN1P54259 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATN1P54259 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATN1P54259 AL512353.2-201ENST00000448759 1962 ntBASIC20.6■□□□□ 0.89
ATN1P54259 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATN1P54259 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.6■□□□□ 0.89
ATN1P54259 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
ATN1P54259 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATN1P54259 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.6■□□□□ 0.89
ATN1P54259 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATN1P54259 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATN1P54259 MTND4LP12-201ENST00000448237 295 ntBASIC20.6■□□□□ 0.89
ATN1P54259 RPL13AP23-201ENST00000480739 586 ntBASIC20.6■□□□□ 0.89
ATN1P54259 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.6■□□□□ 0.89
ATN1P54259 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.6■□□□□ 0.89
ATN1P54259 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.6■□□□□ 0.89
ATN1P54259 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.6■□□□□ 0.89
ATN1P54259 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms